38 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STAM2	Signal transducing adapter molecule 2. (524 aa)
	CHMP2B	Charged multivesicular body protein 2b. (213 aa)
	UBAP1	Ubiquitin-associated protein 1. (501 aa)
	CHMP4A	Charged multivesicular body protein 4A. (206 aa)
	Vps4a	Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (437 aa)
	CHMP5	Charged multivesicular body protein 5. (219 aa)
	HGS	Hepatocyte growth factor-regulated tyrosine kinase substrate. (778 aa)
	MVB12B	Multivesicular body subunit 12B. (292 aa)
	VPS36	Vacuolar protein-sorting-associated protein 36. (353 aa)
	ZFYVE1	Zinc finger FYVE domain-containing protein 1. (777 aa)
	VPS37B	Vacuolar protein sorting-associated protein 37B. (239 aa)
	SNF8	Vacuolar-sorting protein SNF8. (228 aa)
	TSG101	Tumor susceptibility gene 101 protein. (391 aa)
	VPS25	Vacuolar protein sorting 25 homolog. (176 aa)
	CHMP2A	Charged multivesicular body protein 2a. (222 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	ENSFDAP00000001862	annotation not available (353 aa)
	STAM	Signal transducing adapter molecule 1. (542 aa)
	VPS4B	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (444 aa)
	CHMP4B	Charged multivesicular body protein 4b. (224 aa)
	ZFYVE19	Zinc finger FYVE domain-containing protein 19. (403 aa)
	VTA1	Vacuolar protein sorting-associated protein VTA1 like protein. (307 aa)
	MDP1	Magnesium-dependent phosphatase 1. (161 aa)
	VPS37C	VPS37C subunit of ESCRT-I. (225 aa)
	UBA52	KxDL motif containing 1. (232 aa)
	LOC104863283	Charged multivesicular body protein 3. (221 aa)
	VPS28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (221 aa)
	H920_05903	Charged multivesicular body protein 3. (197 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	VPS37D	Vacuolar protein sorting-associated protein 37D. (252 aa)
	Tm9sf1	Transmembrane 9 superfamily member 1. (606 aa)
	CHMP7	Charged multivesicular body protein 7. (448 aa)
	C17orf75	Uncharacterized protein. (394 aa)
	VPS37A	VPS37A subunit of ESCRT-I. (397 aa)
	UBAP1L	Ubiquitin-associated protein 1. (362 aa)
	CHMP4C	Charged multivesicular body protein 4c. (229 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	CHMP6	Charged multivesicular body protein 6. (192 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C17orf75	CHMP2A	ENSFDAP00000016941	ENSFDAP00000003380	Uncharacterized protein.	Charged multivesicular body protein 2a.	0.959
C17orf75	CHMP2B	ENSFDAP00000016941	ENSFDAP00000010771	Uncharacterized protein.	Charged multivesicular body protein 2b.	0.811
C17orf75	CHMP4A	ENSFDAP00000016941	ENSFDAP00000009273	Uncharacterized protein.	Charged multivesicular body protein 4A.	0.879
C17orf75	CHMP4B	ENSFDAP00000016941	ENSFDAP00000000621	Uncharacterized protein.	Charged multivesicular body protein 4b.	0.879
C17orf75	CHMP4C	ENSFDAP00000016941	ENSFDAP00000013431	Uncharacterized protein.	Charged multivesicular body protein 4c.	0.879
C17orf75	CHMP5	ENSFDAP00000016941	ENSFDAP00000008410	Uncharacterized protein.	Charged multivesicular body protein 5.	0.924
C17orf75	CHMP7	ENSFDAP00000016941	ENSFDAP00000017012	Uncharacterized protein.	Charged multivesicular body protein 7.	0.887
C17orf75	ENSFDAP00000001862	ENSFDAP00000016941	ENSFDAP00000001862	Uncharacterized protein.	annotation not available	0.923
C17orf75	H920_05903	ENSFDAP00000016941	ENSFDAP00000020017	Uncharacterized protein.	Charged multivesicular body protein 3.	0.893
C17orf75	LOC104863283	ENSFDAP00000016941	ENSFDAP00000021518	Uncharacterized protein.	Charged multivesicular body protein 3.	0.893
C17orf75	MDP1	ENSFDAP00000016941	ENSFDAP00000023102	Uncharacterized protein.	Magnesium-dependent phosphatase 1.	0.784
C17orf75	MVB12B	ENSFDAP00000016941	ENSFDAP00000005869	Uncharacterized protein.	Multivesicular body subunit 12B.	0.759
C17orf75	SNF8	ENSFDAP00000016941	ENSFDAP00000003871	Uncharacterized protein.	Vacuolar-sorting protein SNF8.	0.984
C17orf75	TSG101	ENSFDAP00000016941	ENSFDAP00000003710	Uncharacterized protein.	Tumor susceptibility gene 101 protein.	0.794
C17orf75	Tm9sf1	ENSFDAP00000016941	ENSFDAP00000017830	Uncharacterized protein.	Transmembrane 9 superfamily member 1.	0.879
C17orf75	VPS25	ENSFDAP00000016941	ENSFDAP00000003604	Uncharacterized protein.	Vacuolar protein sorting 25 homolog.	0.987
C17orf75	VPS28	ENSFDAP00000016941	ENSFDAP00000020626	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.919
C17orf75	VPS36	ENSFDAP00000016941	ENSFDAP00000005260	Uncharacterized protein.	Vacuolar protein-sorting-associated protein 36.	0.983
C17orf75	VPS37A	ENSFDAP00000016941	ENSFDAP00000016533	Uncharacterized protein.	VPS37A subunit of ESCRT-I.	0.644
C17orf75	VPS37B	ENSFDAP00000016941	ENSFDAP00000004935	Uncharacterized protein.	Vacuolar protein sorting-associated protein 37B.	0.644