16 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104854401	Probable ATP-dependent RNA helicase DDX58. (520 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	MAVS	Mitochondrial antiviral-signaling protein. (507 aa)
	RNF135	Ring finger protein 135. (389 aa)
	TAX1BP1	Tax1-binding protein 1 like protein. (839 aa)
	RNF125	E3 ubiquitin-protein ligase RNF125. (138 aa)
	ENSFDAP00000018123	annotation not available (101 aa)
	HERC5	Putative E3 ubiquitin-protein ligase HERC6. (925 aa)
	RNF216	E3 ubiquitin-protein ligase RNF216. (917 aa)
	TBK1	Serine/threonine-protein kinase TBK1. (729 aa)
	IRF3	Interferon regulatory factor 3. (428 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	TNFAIP3	Tumor necrosis factor alpha-induced protein 3. (755 aa)
	OTUD5	OTU domain-containing protein 5. (370 aa)
	Ikbke	Inhibitor of nuclear factor kappa-B kinase subunit epsilon. (130 aa)
	NLRX1	NLR family member X1. (972 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFDAP00000002920	Ikbke	ENSFDAP00000002920	ENSFDAP00000001268	annotation not available	Inhibitor of nuclear factor kappa-B kinase subunit epsilon.	0.642
ENSFDAP00000002920	LOC104854401	ENSFDAP00000002920	ENSFDAP00000002186	annotation not available	Probable ATP-dependent RNA helicase DDX58.	0.858
ENSFDAP00000002920	MAVS	ENSFDAP00000002920	ENSFDAP00000003691	annotation not available	Mitochondrial antiviral-signaling protein.	0.813
ENSFDAP00000002920	NLRX1	ENSFDAP00000002920	ENSFDAP00000001485	annotation not available	NLR family member X1.	0.572
ENSFDAP00000002920	OTUD5	ENSFDAP00000002920	ENSFDAP00000021067	annotation not available	OTU domain-containing protein 5.	0.870
ENSFDAP00000002920	RNF135	ENSFDAP00000002920	ENSFDAP00000004178	annotation not available	Ring finger protein 135.	0.633
ENSFDAP00000002920	RNF216	ENSFDAP00000002920	ENSFDAP00000011696	annotation not available	E3 ubiquitin-protein ligase RNF216.	0.873
ENSFDAP00000002920	TBK1	ENSFDAP00000002920	ENSFDAP00000017895	annotation not available	Serine/threonine-protein kinase TBK1.	0.642
ENSFDAP00000002920	TNFAIP3	ENSFDAP00000002920	ENSFDAP00000019613	annotation not available	Tumor necrosis factor alpha-induced protein 3.	0.863
ENSFDAP00000002920	Ubc	ENSFDAP00000002920	ENSFDAP00000018389	annotation not available	Polyubiquitin-B.	0.987
ENSFDAP00000018123	IRF3	ENSFDAP00000018123	ENSFDAP00000017443	annotation not available	Interferon regulatory factor 3.	0.875
HERC5	IRF3	ENSFDAP00000007034	ENSFDAP00000017443	Putative E3 ubiquitin-protein ligase HERC6.	Interferon regulatory factor 3.	0.561
HERC5	LOC104854401	ENSFDAP00000007034	ENSFDAP00000002186	Putative E3 ubiquitin-protein ligase HERC6.	Probable ATP-dependent RNA helicase DDX58.	0.871
HERC5	Ubc	ENSFDAP00000007034	ENSFDAP00000018389	Putative E3 ubiquitin-protein ligase HERC6.	Polyubiquitin-B.	0.603
IRF3	ENSFDAP00000018123	ENSFDAP00000017443	ENSFDAP00000018123	Interferon regulatory factor 3.	annotation not available	0.875
IRF3	HERC5	ENSFDAP00000017443	ENSFDAP00000007034	Interferon regulatory factor 3.	Putative E3 ubiquitin-protein ligase HERC6.	0.561
IRF3	Ikbke	ENSFDAP00000017443	ENSFDAP00000001268	Interferon regulatory factor 3.	Inhibitor of nuclear factor kappa-B kinase subunit epsilon.	0.983
IRF3	LOC104854401	ENSFDAP00000017443	ENSFDAP00000002186	Interferon regulatory factor 3.	Probable ATP-dependent RNA helicase DDX58.	0.811
IRF3	MAVS	ENSFDAP00000017443	ENSFDAP00000003691	Interferon regulatory factor 3.	Mitochondrial antiviral-signaling protein.	0.975
IRF3	RNF135	ENSFDAP00000017443	ENSFDAP00000004178	Interferon regulatory factor 3.	Ring finger protein 135.	0.587