STRINGSTRING
UBA52 UBA52 Tubb4b Tubb4b LOC104861364 LOC104861364 DYNC1LI2 DYNC1LI2 ENSFDAP00000002789 ENSFDAP00000002789 H920_06518 H920_06518 ENSFDAP00000002920 ENSFDAP00000002920 TUBB1 TUBB1 IFT88 IFT88 ENSFDAP00000006648 ENSFDAP00000006648 LOC104859914 LOC104859914 DYNC1I2 DYNC1I2 TUBB4A TUBB4A ARL13B ARL13B H920_07462 H920_07462 H920_06774 H920_06774 LOC104861955 LOC104861955 HDAC6 HDAC6 ENSFDAP00000011603 ENSFDAP00000011603 TUBA4A TUBA4A TUBE1 TUBE1 H920_18855 H920_18855 UBE2V1 UBE2V1 PARK7 PARK7 RPS27A RPS27A LOC104859867 LOC104859867 LOC104875392 LOC104875392 TUBA8 TUBA8 LOC104849456 LOC104849456 ENSFDAP00000017776 ENSFDAP00000017776 LOC104861958 LOC104861958 Ubc Ubc Dynll1 Dynll1 DYNC1H1 DYNC1H1 DYNC1LI1 DYNC1LI1 LOC104861363 LOC104861363 VIM VIM DYNC1I1 DYNC1I1 CFTR CFTR LOC104851822 LOC104851822 DYNLL2 DYNLL2 CETN3 CETN3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBA52KxDL motif containing 1. (232 aa)
Tubb4bTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
LOC104861364Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (423 aa)
DYNC1LI2Dynein cytoplasmic 1 light intermediate chain 2. (456 aa)
ENSFDAP00000002789annotation not available (79 aa)
H920_06518Putative tubulin beta chain-like protein ENSP00000290377; Belongs to the tubulin family. (284 aa)
ENSFDAP00000002920annotation not available (87 aa)
TUBB1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
IFT88Intraflagellar transport protein 88 like protein. (825 aa)
ENSFDAP00000006648annotation not available (129 aa)
LOC104859914Tubulin alpha-3 chain-like. (297 aa)
DYNC1I2Cytoplasmic dynein 1 intermediate chain 2. (638 aa)
TUBB4ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (436 aa)
ARL13BADP-ribosylation factor-like protein 13B. (430 aa)
H920_07462Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
H920_06774Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (446 aa)
LOC104861955Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
HDAC6Histone deacetylase 6. (1108 aa)
ENSFDAP00000011603annotation not available (308 aa)
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
TUBE1Tubulin epsilon chain; Belongs to the tubulin family. (476 aa)
H920_18855Tubulin alpha-1C chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (246 aa)
UBE2V1Ubiquitin-conjugating enzyme E2 variant 1. (175 aa)
PARK7Protein DJ-1. (189 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
LOC104859867Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC104875392Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC104849456E3 ubiquitin-protein ligase parkin. (243 aa)
ENSFDAP00000017776annotation not available (72 aa)
LOC104861958Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
UbcPolyubiquitin-B. (235 aa)
Dynll1Dynein light chain. (89 aa)
DYNC1H1Cytoplasmic dynein 1 heavy chain 1. (4606 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (496 aa)
LOC104861363Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (444 aa)
VIMVimentin; Belongs to the intermediate filament family. (411 aa)
DYNC1I1Cytoplasmic dynein 1 intermediate chain 1. (628 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1480 aa)
LOC104851822Dynein light chain. (89 aa)
DYNLL2Dynein light chain. (89 aa)
CETN3Centrin-3. (231 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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