STRINGSTRING
CETN3 CETN3 LOC104861364 LOC104861364 Tubb4b Tubb4b ENSFDAP00000017826 ENSFDAP00000017826 ENSFDAP00000017776 ENSFDAP00000017776 DYNC1LI2 DYNC1LI2 TOMM6 TOMM6 ENSFDAP00000002789 ENSFDAP00000002789 H920_06518 H920_06518 ENSFDAP00000002920 ENSFDAP00000002920 TUBB1 TUBB1 LOC104849456 LOC104849456 SQSTM1 SQSTM1 PGAM5 PGAM5 PLIN2 PLIN2 TUBA8 TUBA8 ULK2 ULK2 TOMM70 TOMM70 PEX5L PEX5L LOC104875392 LOC104875392 LOC104859867 LOC104859867 H920_07688 H920_07688 RPS27A RPS27A USP30 USP30 PARK7 PARK7 Atg5 Atg5 ILRUN ILRUN UBE2V1 UBE2V1 IFT88 IFT88 CSNK2A2 CSNK2A2 ATG12 ATG12 ENSFDAP00000006648 ENSFDAP00000006648 PEX5 PEX5 LOC104859914 LOC104859914 ENSFDAP00000007466 ENSFDAP00000007466 Tomm5 Tomm5 DYNC1I2 DYNC1I2 MFN2 MFN2 TUBB4A TUBB4A H920_13791 H920_13791 Csnk2a1 Csnk2a1 ARL13B ARL13B FNDC3B FNDC3B H920_07462 H920_07462 H920_06774 H920_06774 LOC104861955 LOC104861955 Gsap Gsap MAP1LC3A MAP1LC3A HDAC6 HDAC6 ENSFDAP00000011603 ENSFDAP00000011603 TUBA4A TUBA4A TUBE1 TUBE1 ENSFDAP00000011772 ENSFDAP00000011772 FUNDC2 FUNDC2 TOMM22 TOMM22 H920_18855 H920_18855 LOC104851822 LOC104851822 ATM ATM FUNDC1 FUNDC1 CFTR CFTR Mfn1 Mfn1 LOC104868700 LOC104868700 Ly6g5b Ly6g5b DYNC1I1 DYNC1I1 FNDC3A FNDC3A TOMM7 TOMM7 CSNK2B CSNK2B NBR1 NBR1 ULK1 ULK1 TOMM40 TOMM40 TOMM20 TOMM20 Vdac1 Vdac1 VIM VIM LOC104861363 LOC104861363 DYNC1LI1 DYNC1LI1 DYNC1H1 DYNC1H1 Dynll1 Dynll1 Ubc Ubc LOC104861958 LOC104861958 Map1lc3b Map1lc3b UBA52 UBA52 DYNLL2 DYNLL2 ENSFDAP00000022809 ENSFDAP00000022809 TOMM40L TOMM40L MTERF3 MTERF3 PINK1 PINK1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CETN3Centrin-3. (231 aa)
LOC104861364Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (423 aa)
Tubb4bTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
ENSFDAP00000017826annotation not available (133 aa)
ENSFDAP00000017776annotation not available (72 aa)
DYNC1LI2Dynein cytoplasmic 1 light intermediate chain 2. (456 aa)
TOMM6Translocase of outer mitochondrial membrane 6. (74 aa)
ENSFDAP00000002789annotation not available (79 aa)
H920_06518Putative tubulin beta chain-like protein ENSP00000290377; Belongs to the tubulin family. (284 aa)
ENSFDAP00000002920annotation not available (87 aa)
TUBB1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
LOC104849456E3 ubiquitin-protein ligase parkin. (243 aa)
SQSTM1Sequestosome-1. (400 aa)
PGAM5PGAM family member 5, mitochondrial serine/threonine protein phosphatase. (244 aa)
PLIN2Perilipin; Belongs to the perilipin family. (337 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
ULK2Serine/threonine-protein kinase ULK2. (1057 aa)
TOMM70Mitochondrial import receptor subunit TOM70. (599 aa)
PEX5LPEX5-related protein. (596 aa)
LOC104875392Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC104859867Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
H920_07688Voltage-dependent anion-selective channel protein 1. (239 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
USP30Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (382 aa)
PARK7Protein DJ-1. (189 aa)
Atg5Autophagy protein 5; Involved in autophagic vesicle formation. (198 aa)
ILRUNN_BRCA1_IG domain-containing protein. (238 aa)
UBE2V1Ubiquitin-conjugating enzyme E2 variant 1. (175 aa)
IFT88Intraflagellar transport protein 88 like protein. (825 aa)
CSNK2A2Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (315 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (141 aa)
ENSFDAP00000006648annotation not available (129 aa)
PEX5Peroxisomal targeting signal 1 receptor. (640 aa)
LOC104859914Tubulin alpha-3 chain-like. (297 aa)
ENSFDAP00000007466annotation not available (44 aa)
Tomm5Mitochondrial import receptor subunit TOM5 like protein. (51 aa)
DYNC1I2Cytoplasmic dynein 1 intermediate chain 2. (638 aa)
MFN2Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (762 aa)
TUBB4ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (436 aa)
H920_13791Uncharacterized protein. (176 aa)
Csnk2a1Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (391 aa)
ARL13BADP-ribosylation factor-like protein 13B. (430 aa)
FNDC3BFibronectin type III domain-containing protein 3B. (1206 aa)
H920_07462Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
H920_06774Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (446 aa)
LOC104861955Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
GsapGamma-secretase-activating protein. (175 aa)
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (89 aa)
HDAC6Histone deacetylase 6. (1108 aa)
ENSFDAP00000011603annotation not available (308 aa)
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
TUBE1Tubulin epsilon chain; Belongs to the tubulin family. (476 aa)
ENSFDAP00000011772annotation not available (273 aa)
FUNDC2FUN14 domain containing 2. (164 aa)
TOMM22Mitochondrial import receptor subunit TOM22 like protein. (142 aa)
H920_18855Tubulin alpha-1C chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (246 aa)
LOC104851822Dynein light chain. (89 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3061 aa)
FUNDC1FUN14 domain-containing protein 1. (211 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1480 aa)
Mfn1Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (239 aa)
LOC104868700Uncharacterized protein. (301 aa)
Ly6g5bUncharacterized protein. (193 aa)
DYNC1I1Cytoplasmic dynein 1 intermediate chain 1. (628 aa)
FNDC3AFibronectin type-III domain-containing protein 3A. (1198 aa)
TOMM7Mitochondrial import receptor subunit TOM7 like protein. (55 aa)
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (183 aa)
NBR1Next to BRCA1 gene 1 protein. (986 aa)
ULK1Serine/threonine-protein kinase ULK1. (1043 aa)
TOMM40Mitochondrial import receptor subunit TOM40 like protein. (314 aa)
TOMM20Mitochondrial import receptor subunit TOM20 like protein. (145 aa)
Vdac1Voltage-dependent anion-selective channel protein 1. (285 aa)
VIMVimentin; Belongs to the intermediate filament family. (411 aa)
LOC104861363Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (444 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (496 aa)
DYNC1H1Cytoplasmic dynein 1 heavy chain 1. (4606 aa)
Dynll1Dynein light chain. (89 aa)
UbcPolyubiquitin-B. (235 aa)
LOC104861958Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
Map1lc3bMicrotubule associated protein 1 light chain 3 beta. (112 aa)
UBA52KxDL motif containing 1. (232 aa)
DYNLL2Dynein light chain. (89 aa)
ENSFDAP00000022809annotation not available (250 aa)
TOMM40LMitochondrial import receptor subunit TOM40B. (308 aa)
MTERF3mTERF domain-containing protein 1, mitochondrial. (423 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (446 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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