17 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PELI3	Pellino E3 ubiquitin protein ligase family member 3. (445 aa)
	ENSFDAP00000018414	annotation not available (666 aa)
	IKBKG	NF-kappa-B essential modulator. (417 aa)
	UBA52	KxDL motif containing 1. (232 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	ENSFDAP00000006648	annotation not available (129 aa)
	PELI2	Protein pellino like protein 2. (351 aa)
	H920_07462	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
	UBE2V1	Ubiquitin-conjugating enzyme E2 variant 1. (175 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (543 aa)
	Chuk	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (744 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	ENSFDAP00000017776	annotation not available (72 aa)
	PELI1	E3 ubiquitin-protein ligase pellino homolog; E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (418 aa)
	IRAK1	Interleukin 1 receptor associated kinase 1. (453 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (756 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chuk	ENSFDAP00000002920	ENSFDAP00000016676	ENSFDAP00000002920	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	annotation not available	0.666
Chuk	ENSFDAP00000006648	ENSFDAP00000016676	ENSFDAP00000006648	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	annotation not available	0.600
Chuk	ENSFDAP00000017776	ENSFDAP00000016676	ENSFDAP00000017776	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	annotation not available	0.600
Chuk	H920_07462	ENSFDAP00000016676	ENSFDAP00000010112	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.600
Chuk	IKBKB	ENSFDAP00000016676	ENSFDAP00000002634	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.993
Chuk	IKBKG	ENSFDAP00000016676	ENSFDAP00000020434	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	NF-kappa-B essential modulator.	0.989
Chuk	IRAK1	ENSFDAP00000016676	ENSFDAP00000001973	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Interleukin 1 receptor associated kinase 1.	0.905
Chuk	PELI1	ENSFDAP00000016676	ENSFDAP00000001790	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	E3 ubiquitin-protein ligase pellino homolog; E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	0.601
Chuk	PELI2	ENSFDAP00000016676	ENSFDAP00000009262	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Protein pellino like protein 2.	0.600
Chuk	PELI3	ENSFDAP00000016676	ENSFDAP00000016148	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Pellino E3 ubiquitin protein ligase family member 3.	0.600
Chuk	RPS27A	ENSFDAP00000016676	ENSFDAP00000014104	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Ubiquitin-40S ribosomal protein S27a.	0.721
Chuk	TRAF6	ENSFDAP00000016676	ENSFDAP00000015339	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.954
Chuk	UBA52	ENSFDAP00000016676	ENSFDAP00000022032	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	KxDL motif containing 1.	0.666
Chuk	UBE2V1	ENSFDAP00000016676	ENSFDAP00000013309	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Ubiquitin-conjugating enzyme E2 variant 1.	0.803
Chuk	Ubc	ENSFDAP00000016676	ENSFDAP00000018389	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	Polyubiquitin-B.	0.692
ENSFDAP00000002920	Chuk	ENSFDAP00000002920	ENSFDAP00000016676	annotation not available	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.666
ENSFDAP00000002920	ENSFDAP00000006648	ENSFDAP00000002920	ENSFDAP00000006648	annotation not available	annotation not available	0.908
ENSFDAP00000002920	ENSFDAP00000017776	ENSFDAP00000002920	ENSFDAP00000017776	annotation not available	annotation not available	0.908
ENSFDAP00000002920	ENSFDAP00000018414	ENSFDAP00000002920	ENSFDAP00000018414	annotation not available	annotation not available	0.666
ENSFDAP00000002920	H920_07462	ENSFDAP00000002920	ENSFDAP00000010112	annotation not available	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.908