61 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SKP1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (188 aa)
	H920_20354	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	PSMD5	26S proteasome non-ATPase regulatory subunit 5. (504 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	PSMA6	Proteasome subunit alpha type. (247 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (310 aa)
	NFE2L1	Nuclear factor, erythroid 2 like 1. (648 aa)
	H920_07431	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (136 aa)
	PSMA4	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (210 aa)
	PSMC5	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (406 aa)
	GSK3B	Glycogen synthase kinase 3 beta. (442 aa)
	PSMB7	Proteasome subunit beta type-7. (277 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3. (331 aa)
	PSME2	Proteasome activator complex subunit 2. (239 aa)
	PSMC6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (389 aa)
	PRDX1	Peroxiredoxin-1. (199 aa)
	SRXN1	Sulfiredoxin. (129 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	Psmd9	26S proteasome non-ATPase regulatory subunit 9. (223 aa)
	PSMD6	26S proteasome non-ATPase regulatory subunit 6. (340 aa)
	PSME1	Proteasome activator complex subunit 1. (249 aa)
	CUL1	Cullin-1; Belongs to the cullin family. (776 aa)
	PSMC1	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	PSMA1	Proteasome subunit alpha type-1. (264 aa)
	PSMA7	Proteasome endopeptidase complex. (216 aa)
	UBA52	KxDL motif containing 1. (232 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMD12	26S proteasome non-ATPase regulatory subunit 12. (456 aa)
	PSMC4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
	PSMC2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (464 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	RBX1	E3 ubiquitin-protein ligase RBX1. (108 aa)
	PSMD2	Proteasome 26S subunit, non-ATPase 2. (908 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	NFE2L2	Nuclear factor erythroid 2-related factor 2. (602 aa)
	PSME3	Proteasome activator complex subunit 3. (265 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (263 aa)
	EP300	Histone acetyltransferase p300. (2430 aa)
	PSMD4	26S proteasome non-ATPase regulatory subunit 4. (379 aa)
	CREBBP	CREB-binding protein. (2426 aa)
	PSMF1	Proteasome inhibitor PI31 subunit. (271 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (226 aa)
	CREBZF	CREB/ATF bZIP transcription factor. (307 aa)
	PSMD13	26S proteasome non-ATPase regulatory subunit 13. (376 aa)
	PSMD7	26S proteasome non-ATPase regulatory subunit 7. (324 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (391 aa)
	PSMB6	Proteasome subunit beta. (239 aa)
	PSMC3	26S protease regulatory subunit 6A. (440 aa)
	PSMD8	26S proteasome non-ATPase regulatory subunit 8. (350 aa)
	ATF4	Cyclic AMP-dependent transcription factor ATF-4. (352 aa)
	BTRC	F-box/WD repeat-containing protein 1A. (589 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1. (953 aa)
	PSMA5	Proteasome 20S subunit alpha 5. (241 aa)
	H920_01229	Cullin-1; Belongs to the cullin family. (265 aa)
	H920_15675	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (135 aa)
	PSMB9	Proteasome subunit beta type-9. (219 aa)
	PSMB1	Proteasome subunit beta. (240 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATF4	BTRC	ENSFDAP00000000942	ENSFDAP00000000506	Cyclic AMP-dependent transcription factor ATF-4.	F-box/WD repeat-containing protein 1A.	0.790
ATF4	CREBBP	ENSFDAP00000000942	ENSFDAP00000005253	Cyclic AMP-dependent transcription factor ATF-4.	CREB-binding protein.	0.942
ATF4	CREBZF	ENSFDAP00000000942	ENSFDAP00000004448	Cyclic AMP-dependent transcription factor ATF-4.	CREB/ATF bZIP transcription factor.	0.431
ATF4	EP300	ENSFDAP00000000942	ENSFDAP00000005919	Cyclic AMP-dependent transcription factor ATF-4.	Histone acetyltransferase p300.	0.968
ATF4	GSK3B	ENSFDAP00000000942	ENSFDAP00000012099	Cyclic AMP-dependent transcription factor ATF-4.	Glycogen synthase kinase 3 beta.	0.829
ATF4	NFE2L1	ENSFDAP00000000942	ENSFDAP00000013531	Cyclic AMP-dependent transcription factor ATF-4.	Nuclear factor, erythroid 2 like 1.	0.511
ATF4	NFE2L2	ENSFDAP00000000942	ENSFDAP00000007201	Cyclic AMP-dependent transcription factor ATF-4.	Nuclear factor erythroid 2-related factor 2.	0.701
BTRC	ATF4	ENSFDAP00000000506	ENSFDAP00000000942	F-box/WD repeat-containing protein 1A.	Cyclic AMP-dependent transcription factor ATF-4.	0.790
BTRC	CUL1	ENSFDAP00000000506	ENSFDAP00000020019	F-box/WD repeat-containing protein 1A.	Cullin-1; Belongs to the cullin family.	0.989
BTRC	ENSFDAP00000002920	ENSFDAP00000000506	ENSFDAP00000002920	F-box/WD repeat-containing protein 1A.	annotation not available	0.808
BTRC	GSK3B	ENSFDAP00000000506	ENSFDAP00000012099	F-box/WD repeat-containing protein 1A.	Glycogen synthase kinase 3 beta.	0.986
BTRC	H920_01229	ENSFDAP00000000506	ENSFDAP00000018366	F-box/WD repeat-containing protein 1A.	Cullin-1; Belongs to the cullin family.	0.989
BTRC	H920_07431	ENSFDAP00000000506	ENSFDAP00000013050	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	H920_15675	ENSFDAP00000000506	ENSFDAP00000018235	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	H920_20354	ENSFDAP00000000506	ENSFDAP00000015382	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	NFE2L1	ENSFDAP00000000506	ENSFDAP00000013531	F-box/WD repeat-containing protein 1A.	Nuclear factor, erythroid 2 like 1.	0.520
BTRC	NFE2L2	ENSFDAP00000000506	ENSFDAP00000007201	F-box/WD repeat-containing protein 1A.	Nuclear factor erythroid 2-related factor 2.	0.838
BTRC	PSMC1	ENSFDAP00000000506	ENSFDAP00000020286	F-box/WD repeat-containing protein 1A.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.421
BTRC	PSMD14	ENSFDAP00000000506	ENSFDAP00000013708	F-box/WD repeat-containing protein 1A.	26S proteasome non-ATPase regulatory subunit 14.	0.534
BTRC	PSMD4	ENSFDAP00000000506	ENSFDAP00000005658	F-box/WD repeat-containing protein 1A.	26S proteasome non-ATPase regulatory subunit 4.	0.587