STRINGSTRING
AFG38254.1 AFG38254.1 AFG38256.1 AFG38256.1 AFG38257.1 AFG38257.1 AFG38258.1 AFG38258.1 AFG38259.1 AFG38259.1 AFG38260.1 AFG38260.1 AFG38262.1 AFG38262.1 AFG38263.1 AFG38263.1 AFG38264.1 AFG38264.1 AFG38268.1 AFG38268.1 AFG38269.1 AFG38269.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFG38254.1Hypothetical protein. (169 aa)
AFG38256.1Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein. (490 aa)
AFG38257.1Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (403 aa)
AFG38258.1Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain. (717 aa)
AFG38259.1Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: [2Fe-2S] binding domain. (159 aa)
AFG38260.1Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase. (281 aa)
AFG38262.1PFAM: YGGT family. (196 aa)
AFG38263.1PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG. (747 aa)
AFG38264.1N6-adenine-specific methylase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family. (211 aa)
AFG38268.1Hypothetical protein. (115 aa)
AFG38269.1Putative transcriptional regulator; PFAM: Bacterial transcriptional activator domain. (373 aa)
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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