STRINGSTRING
AFG36378.1 AFG36378.1 AFG36379.1 AFG36379.1 AFG36380.1 AFG36380.1 AFG36381.1 AFG36381.1 AFG36382.1 AFG36382.1 AFG36383.1 AFG36383.1 AFG36384.1 AFG36384.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFG36378.1ABC-type sugar transport system, periplasmic component. (346 aa)
AFG36379.1PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (503 aa)
AFG36380.1PFAM: Response regulator receiver domain. (499 aa)
AFG36381.1ABC-type xylose transport system, periplasmic component; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein. (382 aa)
AFG36382.1ABC-type xylose transport system, periplasmic component; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein. (338 aa)
AFG36383.1ABC-type sugar transport system, ATPase component; PFAM: ABC transporter. (508 aa)
AFG36384.1PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (401 aa)
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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