(15 nodes) Mixed, incl. LanC-like protein, eukaryotic, and Noradrenergic neuron differentiation network (Columba livia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHF24	Uncharacterized protein. (272 aa)
	A306_00014911	E3 ubiquitin-protein ligase TRIM11-like. (405 aa)
	DPCD	Uncharacterized protein. (168 aa)
	TMEM53	Transmembrane protein 53. (208 aa)
	ERI3	ERI1 exoribonuclease family member 3. (258 aa)
	RNF220	Ring finger protein 220. (571 aa)
	ZC4H2	Zinc finger, C4H2 domain containing, transcript variant X1. (266 aa)
	CUNH7orf25	Uncharacterized protein. (422 aa)
	A306_00009390	Protein FAM188B2. (467 aa)
	STYXL1	Serine/threonine/tyrosine interacting-like 1. (335 aa)
	LANCL2	LanC lantibiotic synthetase component C-like 2 (Bacterial). (370 aa)
	XK	XK-related protein. (489 aa)
	FAM19A4	Family with sequence similarity 19 (Chemokine (C-C motif)-like), member A4. (182 aa)
	LANCL1	LanC lantibiotic synthetase component C-like 1 (Bacterial). (400 aa)
	VSTM2A	V-set and transmembrane domain containing 2A, transcript variant X1. (240 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUNH7orf25	DPCD	A0A2I0LZF0	A0A2I0LP55	Uncharacterized protein.	Uncharacterized protein.	0.533
CUNH7orf25	LANCL2	A0A2I0LZF0	A0A2I0M4T5	Uncharacterized protein.	LanC lantibiotic synthetase component C-like 2 (Bacterial).	0.469
DPCD	CUNH7orf25	A0A2I0LP55	A0A2I0LZF0	Uncharacterized protein.	Uncharacterized protein.	0.533
ERI3	LANCL1	A0A2I0LP84	A0A2I0MIP1	ERI1 exoribonuclease family member 3.	LanC lantibiotic synthetase component C-like 1 (Bacterial).	0.527
ERI3	RNF220	A0A2I0LP84	A0A2I0LP88	ERI1 exoribonuclease family member 3.	Ring finger protein 220.	0.547
ERI3	TMEM53	A0A2I0LP84	A0A2I0LP82	ERI1 exoribonuclease family member 3.	Transmembrane protein 53.	0.523
LANCL1	ERI3	A0A2I0MIP1	A0A2I0LP84	LanC lantibiotic synthetase component C-like 1 (Bacterial).	ERI1 exoribonuclease family member 3.	0.527
LANCL1	STYXL1	A0A2I0MIP1	A0A2I0M1Z7	LanC lantibiotic synthetase component C-like 1 (Bacterial).	Serine/threonine/tyrosine interacting-like 1.	0.532
LANCL2	CUNH7orf25	A0A2I0M4T5	A0A2I0LZF0	LanC lantibiotic synthetase component C-like 2 (Bacterial).	Uncharacterized protein.	0.469
RNF220	ERI3	A0A2I0LP88	A0A2I0LP84	Ring finger protein 220.	ERI1 exoribonuclease family member 3.	0.547
RNF220	TMEM53	A0A2I0LP88	A0A2I0LP82	Ring finger protein 220.	Transmembrane protein 53.	0.523
RNF220	ZC4H2	A0A2I0LP88	A0A2I0LRK7	Ring finger protein 220.	Zinc finger, C4H2 domain containing, transcript variant X1.	0.566
STYXL1	LANCL1	A0A2I0M1Z7	A0A2I0MIP1	Serine/threonine/tyrosine interacting-like 1.	LanC lantibiotic synthetase component C-like 1 (Bacterial).	0.532
TMEM53	ERI3	A0A2I0LP82	A0A2I0LP84	Transmembrane protein 53.	ERI1 exoribonuclease family member 3.	0.523
TMEM53	RNF220	A0A2I0LP82	A0A2I0LP88	Transmembrane protein 53.	Ring finger protein 220.	0.523
ZC4H2	RNF220	A0A2I0LRK7	A0A2I0LP88	Zinc finger, C4H2 domain containing, transcript variant X1.	Ring finger protein 220.	0.566