18 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPL16	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (199 aa)
	RPS15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (235 aa)
	RPL23A	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (166 aa)
	MRPL17	Mitochondrial ribosomal protein L17. (120 aa)
	RPL23	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPL26L1	Ribosomal protein L26-like 1. (145 aa)
	A306_00011749	FAM194 domain-containing protein. (514 aa)
	MRPL2	Mitochondrial ribosomal protein L2. (297 aa)
	MRPL22	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (211 aa)
	MRPL32	Mitochondrial ribosomal protein L32. (162 aa)
	MRPL20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	MRPL27	Mitochondrial ribosomal protein L27. (139 aa)
	MRPL3	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (393 aa)
	MRPS6	Mitochondrial ribosomal protein S6. (158 aa)
	MRPS9	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (348 aa)
	MRPL19	Mitochondrial ribosomal protein L19. (261 aa)
	MRPL15	Mitochondrial ribosomal protein L15. (294 aa)
	MRPL13	Mitochondrial ribosomal protein L13. (179 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00011749	MRPL13	A0A2I0LUJ8	A0A2I0MXF9	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L13.	0.999
A306_00011749	MRPL15	A0A2I0LUJ8	A0A2I0MX72	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L15.	0.981
A306_00011749	MRPL16	A0A2I0LUJ8	A0A2I0LH37	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.987
A306_00011749	MRPL17	A0A2I0LUJ8	A0A2I0LLJ1	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L17.	0.999
A306_00011749	MRPL19	A0A2I0LUJ8	A0A2I0MU51	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L19.	0.999
A306_00011749	MRPL2	A0A2I0LUJ8	A0A2I0LV88	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L2.	0.987
A306_00011749	MRPL20	A0A2I0LUJ8	A0A2I0M3F4	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.999
A306_00011749	MRPL22	A0A2I0LUJ8	A0A2I0LWH9	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.981
A306_00011749	MRPL27	A0A2I0LUJ8	A0A2I0M7Q2	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L27.	0.998
A306_00011749	MRPL3	A0A2I0LUJ8	A0A2I0MQP8	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.973
A306_00011749	MRPL32	A0A2I0LUJ8	A0A2I0LZG2	FAM194 domain-containing protein.	Mitochondrial ribosomal protein L32.	0.999
A306_00011749	MRPS6	A0A2I0LUJ8	A0A2I0MSL1	FAM194 domain-containing protein.	Mitochondrial ribosomal protein S6.	0.999
A306_00011749	MRPS9	A0A2I0LUJ8	A0A2I0MSR8	FAM194 domain-containing protein.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.997
A306_00011749	RPL23	A0A2I0LUJ8	A0A2I0LN69	FAM194 domain-containing protein.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
A306_00011749	RPL23A	A0A2I0LUJ8	A0A2I0LKU0	FAM194 domain-containing protein.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
A306_00011749	RPL26L1	A0A2I0LUJ8	A0A2I0LST0	FAM194 domain-containing protein.	Ribosomal protein L26-like 1.	0.999
A306_00011749	RPS15	A0A2I0LUJ8	A0A2I0LJX3	FAM194 domain-containing protein.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
MRPL13	A306_00011749	A0A2I0MXF9	A0A2I0LUJ8	Mitochondrial ribosomal protein L13.	FAM194 domain-containing protein.	0.999
MRPL13	MRPL15	A0A2I0MXF9	A0A2I0MX72	Mitochondrial ribosomal protein L13.	Mitochondrial ribosomal protein L15.	0.999
MRPL13	MRPL16	A0A2I0MXF9	A0A2I0LH37	Mitochondrial ribosomal protein L13.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.998