STRINGSTRING
A306_00013807 A306_00013807 FDPS FDPS RUSC1 RUSC1 FNTA FNTA A306_00002460 A306_00002460 PDSS1 PDSS1 PDSS2 PDSS2 GGPS1 GGPS1 FBXO30 FBXO30 NUS1 NUS1 DHDDS DHDDS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A306_00013807Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (305 aa)
FDPSFarnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (304 aa)
RUSC1RUN and SH3 domain containing 1. (859 aa)
FNTAFarnesyltransferase, CAAX box, alpha. (305 aa)
A306_00002460Isopentenyl-diphosphate Delta-isomerase 1. (227 aa)
PDSS1Prenyl (Decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family. (339 aa)
PDSS2Prenyl (Decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family. (334 aa)
GGPS1Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. (299 aa)
FBXO30F-box protein 30. (760 aa)
NUS1NUS1 dehydrodolichyl diphosphate synthase subunit. (145 aa)
DHDDSAlkyl transferase; Belongs to the UPP synthase family. (333 aa)
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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