STRINGSTRING
A306_00014957 A306_00014957 BCO2 BCO2 RUSC2 RUSC2 A306_00012758 A306_00012758 RUSC1 RUSC1 FDPS FDPS RDH8 RDH8 A306_00013448 A306_00013448 DPAGT1 DPAGT1 RETSAT RETSAT MVD MVD RARRES2 RARRES2 PDSS2 PDSS2 A306_00009530 A306_00009530 A306_00009529 A306_00009529 MVK MVK CRABP1 CRABP1 RDH14 RDH14 ALDH1A2 ALDH1A2 DPM1 DPM1 A306_00005967 A306_00005967 A306_00005966 A306_00005966 DHRS3 DHRS3 HMGCR HMGCR BCO1 BCO1 A306_00010427 A306_00010427 LSS LSS DPM2 DPM2 RBP1 RBP1 FDFT1 FDFT1 A306_00010632 A306_00010632 A306_00010633 A306_00010633 RBP4 RBP4 HMGCS1 HMGCS1 DHRS12 DHRS12 ISPD ISPD PDSS1 PDSS1 A306_00002460 A306_00002460 DHRS7 DHRS7 A306_00002034 A306_00002034 A306_00002035 A306_00002035 A306_00003278 A306_00003278 SRD5A3 SRD5A3 DHRSX DHRSX PNPLA4 PNPLA4 A306_00004372 A306_00004372 A306_00003920 A306_00003920 PNPLA2 PNPLA2 COQ2 COQ2 PECR PECR ALDH1A1 ALDH1A1 A306_00005787 A306_00005787 HMGCS2 HMGCS2 ALDH1A3 ALDH1A3 PPAPDC2 PPAPDC2 RPE65 RPE65 A306_00009528 A306_00009528 A306_00009527 A306_00009527 GGPS1 GGPS1 NUS1 NUS1 RDH10 RDH10 SDR16C5 SDR16C5 DHDDS DHDDS A306_00001535 A306_00001535 RDH5 RDH5 A306_00001536 A306_00001536 ALDH8A1 ALDH8A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A306_00014957WW domain-containing oxidoreductase. (116 aa)
BCO2Beta-carotene oxygenase 2, transcript variant X1. (609 aa)
RUSC2RUN and SH3 domain containing 2, transcript variant X1. (1614 aa)
A306_00012758All-trans-retinol 13,14-reductase-like. (453 aa)
RUSC1RUN and SH3 domain containing 1. (859 aa)
FDPSFarnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (304 aa)
RDH8Retinol dehydrogenase 8 (All-trans); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (277 aa)
A306_00013448Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
DPAGT1UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase. (406 aa)
RETSATRetinol saturase (All-trans-retinol 13,14-reductase). (407 aa)
MVDDiphosphomevalonate decarboxylase. (356 aa)
RARRES2Retinoic acid receptor responder (Tazarotene induced) 2. (115 aa)
PDSS2Prenyl (Decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family. (334 aa)
A306_00009530Alcohol dehydrogenase class-3. (239 aa)
A306_00009529Alcohol dehydrogenase 1-like. (376 aa)
MVKMevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (397 aa)
CRABP1Cellular retinoic acid binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (110 aa)
RDH14Retinol dehydrogenase 14 (All-trans/9-cis/11-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)
ALDH1A2Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family. (549 aa)
DPM1Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. (223 aa)
A306_00005967Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (564 aa)
A306_00005966Bile salt-activated lipase. (165 aa)
DHRS3Dehydrogenase/reductase (SDR family) member 3. (155 aa)
HMGCR3-hydroxy-3-methylglutaryl coenzyme A reductase. (882 aa)
BCO1Beta-carotene oxygenase 1. (526 aa)
A306_00010427Cytochrome P450 1B1; Belongs to the cytochrome P450 family. (415 aa)
LSSTerpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (634 aa)
DPM2Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family. (114 aa)
RBP1Retinol binding protein 1, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
FDFT1Farnesyl-diphosphate farnesyltransferase 1. (390 aa)
A306_00010632Cytochrome P450 26C1; Belongs to the cytochrome P450 family. (335 aa)
A306_00010633Cytochrome P450 26A1; Belongs to the cytochrome P450 family. (353 aa)
RBP4Retinol binding protein 4, plasma, transcript variant X1; Belongs to the calycin superfamily. Lipocalin family. (199 aa)
HMGCS13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (522 aa)
DHRS12Dehydrogenase/reductase (SDR family) member 12. (323 aa)
ISPDIsoprenoid synthase domain containing. (325 aa)
PDSS1Prenyl (Decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family. (339 aa)
A306_00002460Isopentenyl-diphosphate Delta-isomerase 1. (227 aa)
DHRS7Dehydrogenase/reductase (SDR family) member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (262 aa)
A306_00002034Retinol dehydrogenase 12-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
A306_00002035Retinol dehydrogenase 12-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (304 aa)
A306_00003278Cytochrome P450 26B1; Belongs to the cytochrome P450 family. (390 aa)
SRD5A3Steroid 5 alpha-reductase 3. (415 aa)
DHRSXDehydrogenase/reductase (SDR family) X-linked. (262 aa)
PNPLA4Patatin-like phospholipase domain containing 4. (320 aa)
A306_00004372Patatin-like phospholipase domain-containing protein 2. (499 aa)
A306_00003920Retinol dehydrogenase 7. (337 aa)
PNPLA2PNPLA domain-containing protein. (459 aa)
COQ24-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. (258 aa)
PECRPeroxisomal trans-2-enoyl-CoA reductase. (218 aa)
ALDH1A1Aldehyde dehydrogenase 1 family, member A1, transcript variant X2; Belongs to the aldehyde dehydrogenase family. (509 aa)
A306_00005787Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
HMGCS23-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (403 aa)
ALDH1A3Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family. (475 aa)
PPAPDC2Phosphatidic acid phosphatase type 2 domain containing 2. (203 aa)
RPE65Retinal pigment epithelium-specific protein 65kDa. (530 aa)
A306_00009528Alcohol dehydrogenase 1-like. (330 aa)
A306_00009527Alcohol dehydrogenase 1-like. (110 aa)
GGPS1Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. (299 aa)
NUS1NUS1 dehydrodolichyl diphosphate synthase subunit. (145 aa)
RDH10Retinol dehydrogenase 10 (All-trans); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
SDR16C5Short chain dehydrogenase/reductase family 16C, member 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
DHDDSAlkyl transferase; Belongs to the UPP synthase family. (333 aa)
A306_00001535Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (147 aa)
RDH5Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (219 aa)
A306_00001536Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (150 aa)
ALDH8A1Aldehyde dehydrogenase 8 family, member A1; Belongs to the aldehyde dehydrogenase family. (487 aa)
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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