30 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PJA2	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1. (693 aa)
	A306_00007557	Uncharacterized protein. (406 aa)
	A306_00007618	Cis-aconitate decarboxylase. (493 aa)
	WDFY1	WD repeat and FYVE domain containing 1. (462 aa)
	OTUD4	OTU deubiquitinase 4, transcript variant X2. (1141 aa)
	GRAMD4	GRAM domain containing 4. (578 aa)
	LGR4	Leucine-rich repeat containing G protein-coupled receptor 4. (864 aa)
	IRF7	Interferon regulatory factor 7. (530 aa)
	A306_00014478	Cytochrome b-245 light chain. (162 aa)
	APPL2	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (495 aa)
	TLR3	Toll-like receptor 3; Belongs to the Toll-like receptor family. (895 aa)
	TYRO3	TYRO3 protein tyrosine kinase. (842 aa)
	ACOD1	Uncharacterized protein. (474 aa)
	LRRC14	Leucine rich repeat containing 14. (400 aa)
	TNFAIP3	Tumor necrosis factor, alpha-induced protein 3. (809 aa)
	RSAD2	Radical S-adenosyl methionine domain containing 2. (329 aa)
	LYN	Tyrosine-protein kinase. (513 aa)
	A306_00001192	Leucine-rich repeat-containing protein 40. (266 aa)
	SARM1	Sterile alpha and TIR motif containing 1. (686 aa)
	CACTIN	Cactin, spliceosome C complex subunit. (750 aa)
	IFI35	Interferon-induced protein 35. (418 aa)
	MFHAS1	Malignant fibrous histiocytoma amplified sequence 1. (951 aa)
	TIRAP	Toll-interleukin 1 receptor (TIR) domain containing adaptor protein, transcript variant X1. (207 aa)
	APPL1	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (704 aa)
	PELI1	Pellino E3 ubiquitin protein ligase 1. (454 aa)
	SMPDL3B	XK-related protein. (648 aa)
	CD14	CD14 molecule. (416 aa)
	RAB7B	RAB7B, member RAS oncogene family. (200 aa)
	TLR5	Toll-like receptor 5; Belongs to the Toll-like receptor family. (860 aa)
	CUNHXorf21	Uncharacterized protein. (292 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00001192	PJA2	A0A2I0MW52	A0A2I0M8U0	Leucine-rich repeat-containing protein 40.	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1.	0.414
A306_00007618	ACOD1	A0A2I0MB79	A0A2I0MT41	Cis-aconitate decarboxylase.	Uncharacterized protein.	0.902
ACOD1	A306_00007618	A0A2I0MT41	A0A2I0MB79	Uncharacterized protein.	Cis-aconitate decarboxylase.	0.902
APPL1	APPL2	A0A2I0LUC8	A0A2I0MK58	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.984
APPL1	WDFY1	A0A2I0LUC8	A0A2I0MBN4	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	WD repeat and FYVE domain containing 1.	0.452
APPL2	APPL1	A0A2I0MK58	A0A2I0LUC8	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.984
APPL2	WDFY1	A0A2I0MK58	A0A2I0MBN4	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	WD repeat and FYVE domain containing 1.	0.452
IFI35	IRF7	A0A2I0LN94	A0A2I0MIC3	Interferon-induced protein 35.	Interferon regulatory factor 7.	0.645
IFI35	RSAD2	A0A2I0LN94	A0A2I0MVE3	Interferon-induced protein 35.	Radical S-adenosyl methionine domain containing 2.	0.485
IRF7	IFI35	A0A2I0MIC3	A0A2I0LN94	Interferon regulatory factor 7.	Interferon-induced protein 35.	0.645
IRF7	RSAD2	A0A2I0MIC3	A0A2I0MVE3	Interferon regulatory factor 7.	Radical S-adenosyl methionine domain containing 2.	0.630
IRF7	TLR3	A0A2I0MIC3	A0A2I0MMS5	Interferon regulatory factor 7.	Toll-like receptor 3; Belongs to the Toll-like receptor family.	0.724
IRF7	TNFAIP3	A0A2I0MIC3	A0A2I0MUM4	Interferon regulatory factor 7.	Tumor necrosis factor, alpha-induced protein 3.	0.414
LGR4	PJA2	A0A2I0MHN4	A0A2I0M8U0	Leucine-rich repeat containing G protein-coupled receptor 4.	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1.	0.534
MFHAS1	PJA2	A0A2I0LXP3	A0A2I0M8U0	Malignant fibrous histiocytoma amplified sequence 1.	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1.	0.577
PJA2	A306_00001192	A0A2I0M8U0	A0A2I0MW52	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1.	Leucine-rich repeat-containing protein 40.	0.414
PJA2	LGR4	A0A2I0M8U0	A0A2I0MHN4	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1.	Leucine-rich repeat containing G protein-coupled receptor 4.	0.534
PJA2	MFHAS1	A0A2I0M8U0	A0A2I0LXP3	Praja ring finger 2, E3 ubiquitin protein ligase, transcript variant X1.	Malignant fibrous histiocytoma amplified sequence 1.	0.577
RSAD2	IFI35	A0A2I0MVE3	A0A2I0LN94	Radical S-adenosyl methionine domain containing 2.	Interferon-induced protein 35.	0.485
RSAD2	IRF7	A0A2I0MVE3	A0A2I0MIC3	Radical S-adenosyl methionine domain containing 2.	Interferon regulatory factor 7.	0.630