STRINGSTRING
TKFC TKFC FAM3A FAM3A A306_00000498 A306_00000498 ADAR ADAR POLR3D POLR3D CACTIN CACTIN SERPING1 SERPING1 A306_00014370 A306_00014370 DHX58 DHX58 A306_00000118 A306_00000118 TRIM62 TRIM62 DCST1 DCST1 SAMHD1 SAMHD1 MED1 MED1 IFI35 IFI35 GRN GRN YTHDF2 YTHDF2 NLRC3 NLRC3 NLRC5 NLRC5 CADM1 CADM1 TMEM173 TMEM173 DRD2 DRD2 A306_00012732 A306_00012732 SFPQ SFPQ CRTAM CRTAM MATR3 MATR3 GFER GFER MASP1 MASP1 APPL1 APPL1 POLR3F POLR3F NLRX1 NLRX1 TIRAP TIRAP A306_00010010 A306_00010010 NLRC4 NLRC4 RNF185 RNF185 IKBKE IKBKE IL12A IL12A NCF1 NCF1 ZNFX1 ZNFX1 N4BP1 N4BP1 A306_00006194 A306_00006194 MUL1 MUL1 MASP2 MASP2 CARD9 CARD9 SOCS1 SOCS1 DUSP10 DUSP10 SUSD4 SUSD4 CUNHXorf21 CUNHXorf21 LSM14A LSM14A TRAFD1 TRAFD1 ATG12 ATG12 CASP6 CASP6 IL12B IL12B NONO NONO SH2D1A SH2D1A A306_00007618 A306_00007618 LRP8 LRP8 PSPC1 PSPC1 NMI NMI XRCC5 XRCC5 A306_00006660 A306_00006660 PARP9 PARP9 A306_00006661 A306_00006661 EREG EREG IL21 IL21 IGF2 IGF2 FADD FADD IRF7 IRF7 NFE2L2 NFE2L2 TBK1 TBK1 APPL2 APPL2 TTLL12 TTLL12 POLR3B POLR3B A306_00004512 A306_00004512 SH2D1B SH2D1B CD96 CD96 UBE2K UBE2K OTOP1 OTOP1 MAVS MAVS CNOT7 CNOT7 HMGB2 HMGB2 TYRO3 TYRO3 COCH COCH RASGRP1 RASGRP1 LAMP1 LAMP1 TOMM70 TOMM70 ACOD1 ACOD1 ATG5 ATG5 MB21D1 MB21D1 TNFAIP3 TNFAIP3 AKIRIN2 AKIRIN2 YTHDF3 YTHDF3 PTPN2 PTPN2 RIOK3 RIOK3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TKFCTriokinase/FMN cyclase. (424 aa)
FAM3AFamily with sequence similarity 3, member A. (170 aa)
A306_00000498Ig-like domain-containing protein. (107 aa)
ADARAdenosine deaminase, RNA-specific. (650 aa)
POLR3DPolymerase (RNA) III (DNA directed) polypeptide D, 44kDa. (346 aa)
CACTINCactin, spliceosome C complex subunit. (750 aa)
SERPING1Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family. (342 aa)
A306_00014370Ficolin-2. (318 aa)
DHX58DEXH (Asp-Glu-X-His) box polypeptide 58. (674 aa)
A306_00000118RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (514 aa)
TRIM62Tripartite motif containing 62. (463 aa)
DCST1DC-STAMP domain containing 1. (840 aa)
SAMHD1SAM domain and HD domain 1. (570 aa)
MED1Mediator complex subunit 1. (939 aa)
IFI35Interferon-induced protein 35. (418 aa)
GRNGranulin. (265 aa)
YTHDF2YTH N(6)-methyladenosine RNA binding protein 2. (535 aa)
NLRC3NLR family, CARD domain containing 3. (1112 aa)
NLRC5NLR family, CARD domain containing 5. (1865 aa)
CADM1Cell adhesion molecule 1. (617 aa)
TMEM173Transmembrane protein 173. (384 aa)
DRD2Dopamine receptor D2, transcript variant X1; Belongs to the G-protein coupled receptor 1 family. (447 aa)
A306_00012732Putative LOC102087174. (403 aa)
SFPQSplicing factor proline/glutamine-rich. (438 aa)
CRTAMCytotoxic and regulatory T cell molecule. (531 aa)
MATR3Matrin 3. (902 aa)
GFERSulfhydryl oxidase. (93 aa)
MASP1Mannan-binding lectin serine protease 1 isoform X1; Belongs to the peptidase S1 family. (802 aa)
APPL1Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (704 aa)
POLR3FDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
NLRX1NLR family member X1. (602 aa)
TIRAPToll-interleukin 1 receptor (TIR) domain containing adaptor protein, transcript variant X1. (207 aa)
A306_00010010Killer cell lectin-like receptor subfamily G member 1. (189 aa)
NLRC4NLR family, CARD domain containing 4. (1031 aa)
RNF185Ring finger protein 185. (194 aa)
IKBKEInhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon. (722 aa)
IL12AInterleukin-12 subunit alpha; Belongs to the IL-6 superfamily. (186 aa)
NCF1Neutrophil cytosolic factor 1. (409 aa)
ZNFX1Zinc finger, NFX1-type containing 1. (1927 aa)
N4BP1NEDD4 binding protein 1. (866 aa)
A306_00006194Phospholipase A(2). (138 aa)
MUL1Mitochondrial E3 ubiquitin protein ligase 1. (373 aa)
MASP2Mannan-binding lectin serine peptidase 2, transcript variant X2. (290 aa)
CARD9Caspase recruitment domain family, member 9. (541 aa)
SOCS1Suppressor of cytokine signaling 1. (207 aa)
DUSP10Dual specificity phosphatase 10. (479 aa)
SUSD4Sushi domain containing 4. (556 aa)
CUNHXorf21Uncharacterized protein. (292 aa)
LSM14ALSM14A mRNA processing body assembly factor, transcript variant X1. (461 aa)
TRAFD1TRAF-type zinc finger domain containing 1, transcript variant X1. (539 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (160 aa)
CASP6Caspase 6, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (303 aa)
IL12BInterleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (315 aa)
NONONon-POU domain containing, octamer-binding, transcript variant X1. (448 aa)
SH2D1ASH2 domain containing 1A. (127 aa)
A306_00007618Cis-aconitate decarboxylase. (493 aa)
LRP8Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor. (898 aa)
PSPC1Paraspeckle component 1. (526 aa)
NMIN-myc (And STAT) interactor. (382 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (730 aa)
A306_00006660Poly [ADP-ribose] polymerase. (1850 aa)
PARP9Poly (ADP-ribose) polymerase family, member 9, transcript variant X1. (782 aa)
A306_00006661Poly [ADP-ribose] polymerase. (1778 aa)
EREGEpiregulin. (118 aa)
IL21Interleukin; Belongs to the IL-15/IL-21 family. (145 aa)
IGF2Insulin-like growth factor 2. (146 aa)
FADDFas (TNFRSF6)-associated via death domain. (195 aa)
IRF7Interferon regulatory factor 7. (530 aa)
NFE2L2Nuclear factor, erythroid 2-like 2. (582 aa)
TBK1TANK-binding kinase 1. (729 aa)
APPL2Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (495 aa)
TTLL12Tubulin tyrosine ligase-like family member 12. (620 aa)
POLR3BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (900 aa)
A306_00004512Poly [ADP-ribose] polymerase. (311 aa)
SH2D1BSH2 domain containing 1B. (134 aa)
CD96CD96 molecule. (596 aa)
UBE2KUbiquitin-conjugating enzyme E2K; Belongs to the ubiquitin-conjugating enzyme family. (288 aa)
OTOP1Otopetrin 1. (576 aa)
MAVSMitochondrial antiviral signaling protein. (632 aa)
CNOT7CCR4-NOT transcription complex, subunit 7. (285 aa)
HMGB2High mobility group box 2. (207 aa)
TYRO3TYRO3 protein tyrosine kinase. (842 aa)
COCHCochlin. (546 aa)
RASGRP1RAS guanyl releasing protein 1 (Calcium and DAG-regulated). (840 aa)
LAMP1Lysosomal-associated membrane protein 1. (419 aa)
TOMM70TPR_REGION domain-containing protein. (515 aa)
ACOD1Uncharacterized protein. (474 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
MB21D1Mab-21 domain containing 1. (313 aa)
TNFAIP3Tumor necrosis factor, alpha-induced protein 3. (809 aa)
AKIRIN2Akirin 2. (112 aa)
YTHDF3YTH N(6)-methyladenosine RNA binding protein 3. (574 aa)
PTPN2Tyrosine-protein phosphatase non-receptor type. (408 aa)
RIOK3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (483 aa)
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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