20 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DGKQ	Diacylglycerol kinase. (845 aa)
	STARD4	StAR-related lipid transfer (START) domain containing 4. (172 aa)
	ABCG1	ATP-binding cassette, sub-family G (WHITE), member 1. (644 aa)
	PODN	Podocan. (538 aa)
	ARV1	ARV1 homolog, fatty acid homeostatsis modulator. (199 aa)
	A306_00002228	Serpin A3-4; Belongs to the serpin family. (413 aa)
	LPCAT3	Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (413 aa)
	SREBF2	Sterol regulatory element binding transcription factor 2. (448 aa)
	TTC39B	Tetratricopeptide repeat domain 39B, transcript variant X1. (554 aa)
	SEC14L2	CRAL-TRIO domain-containing protein. (213 aa)
	EPHX2	Epoxide hydrolase 2, cytoplasmic. (562 aa)
	A306_00000138	Uncharacterized protein. (1075 aa)
	APOA1	Apolipoprotein A-I. (264 aa)
	ERLIN2	ER lipid raft associated 2. (416 aa)
	FGF1	Multifunctional fusion protein; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with integr [...] (155 aa)
	SREBF1	Sterol regulatory element binding transcription factor 1. (1025 aa)
	ABCG4	ATP-binding cassette, sub-family G (WHITE), member 4, transcript variant X1. (642 aa)
	SEC14L5	SEC14-like lipid binding 5. (710 aa)
	ERLIN1	ER lipid raft associated 1. (294 aa)
	TTC39A	Tetratricopeptide repeat domain 39A. (569 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00000138	SREBF1	A0A2I0LP57	A0A2I0LTK7	Uncharacterized protein.	Sterol regulatory element binding transcription factor 1.	0.951
A306_00000138	SREBF2	A0A2I0LP57	A0A2I0MJP3	Uncharacterized protein.	Sterol regulatory element binding transcription factor 2.	0.951
ABCG1	APOA1	R7VNH5	A0A2I0LQE2	ATP-binding cassette, sub-family G (WHITE), member 1.	Apolipoprotein A-I.	0.580
ABCG4	APOA1	A0A2I0LVD4	A0A2I0LQE2	ATP-binding cassette, sub-family G (WHITE), member 4, transcript variant X1.	Apolipoprotein A-I.	0.580
APOA1	ABCG1	A0A2I0LQE2	R7VNH5	Apolipoprotein A-I.	ATP-binding cassette, sub-family G (WHITE), member 1.	0.580
APOA1	ABCG4	A0A2I0LQE2	A0A2I0LVD4	Apolipoprotein A-I.	ATP-binding cassette, sub-family G (WHITE), member 4, transcript variant X1.	0.580
ERLIN1	ERLIN2	A0A2I0LX66	A0A2I0LQZ7	ER lipid raft associated 1.	ER lipid raft associated 2.	0.591
ERLIN2	ERLIN1	A0A2I0LQZ7	A0A2I0LX66	ER lipid raft associated 2.	ER lipid raft associated 1.	0.591
SREBF1	A306_00000138	A0A2I0LTK7	A0A2I0LP57	Sterol regulatory element binding transcription factor 1.	Uncharacterized protein.	0.951
SREBF1	SREBF2	A0A2I0LTK7	A0A2I0MJP3	Sterol regulatory element binding transcription factor 1.	Sterol regulatory element binding transcription factor 2.	0.443
SREBF2	A306_00000138	A0A2I0MJP3	A0A2I0LP57	Sterol regulatory element binding transcription factor 2.	Uncharacterized protein.	0.951
SREBF2	SREBF1	A0A2I0MJP3	A0A2I0LTK7	Sterol regulatory element binding transcription factor 2.	Sterol regulatory element binding transcription factor 1.	0.443