STRINGSTRING
A306_00014015 A306_00014015 WDFY4 WDFY4 A306_00000459 A306_00000459 ADAR ADAR A306_00014013 A306_00014013 DHX58 DHX58 CLPB CLPB ZC3H12A ZC3H12A POU2AF1 POU2AF1 IL12A IL12A DDX58 DDX58 RRP1B RRP1B LSM14A LSM14A GBF1 GBF1 IL21 IL21 A306_00007179 A306_00007179 A306_00007180 A306_00007180 IFIH1 IFIH1 TLR3 TLR3 DFNA5 DFNA5 TOMM70 TOMM70 RIOK3 RIOK3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A306_00014015Mitogen-activated protein kinase. (167 aa)
WDFY4WDFY family member 4. (2835 aa)
A306_00000459SCY domain-containing protein. (126 aa)
ADARAdenosine deaminase, RNA-specific. (650 aa)
A306_00014013Mitogen-activated protein kinase. (182 aa)
DHX58DEXH (Asp-Glu-X-His) box polypeptide 58. (674 aa)
CLPBClpB homolog, mitochondrial AAA ATPase chaperonin. (298 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (642 aa)
POU2AF1POU class 2 associating factor 1. (257 aa)
IL12AInterleukin-12 subunit alpha; Belongs to the IL-6 superfamily. (186 aa)
DDX58DEAD (Asp-Glu-Ala-Asp) box polypeptide 58. (730 aa)
RRP1BRibosomal RNA processing 1B. (782 aa)
LSM14ALSM14A mRNA processing body assembly factor, transcript variant X1. (461 aa)
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1485 aa)
IL21Interleukin; Belongs to the IL-15/IL-21 family. (145 aa)
A306_00007179Mitogen-activated protein kinase 11. (75 aa)
A306_00007180Mitogen-activated protein kinase. (221 aa)
IFIH1Interferon induced with helicase C domain 1. (981 aa)
TLR3Toll-like receptor 3; Belongs to the Toll-like receptor family. (895 aa)
DFNA5Deafness, autosomal dominant 5. (366 aa)
TOMM70TPR_REGION domain-containing protein. (515 aa)
RIOK3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (483 aa)
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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