23 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A306_00015351	Visinin. (156 aa)
	GNAT1	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (302 aa)
	OPN1LW	Opsin 1 (Cone pigments), long-wave-sensitive (Color blindness, protan). (340 aa)
	SLC2A1	Solute carrier family 2 (Facilitated glucose transporter), member 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (484 aa)
	PPEF2	Serine/threonine-protein phosphatase with EF-hands. (669 aa)
	SLC24A2	Solute carrier family 24 (Sodium/potassium/calcium exchanger), member 2, transcript variant X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (651 aa)
	CCDC66	Coiled-coil domain containing 66. (569 aa)
	OPNP	Pinopsin. (349 aa)
	GNAT2	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (395 aa)
	DRAM2	DNA-damage regulated autophagy modulator 2. (266 aa)
	A306_00009817	Uncharacterized protein C2orf71. (1036 aa)
	NYX	Nyctalopin. (472 aa)
	EPB41L4A	Erythrocyte membrane protein band 4.1 like 4A. (663 aa)
	EPB41L5	Erythrocyte membrane protein band 4.1 like 5. (769 aa)
	GNAT3	Guanine nucleotide-binding protein G(T) subunit alpha-3. (354 aa)
	PPEF1	Serine/threonine-protein phosphatase with EF-hands. (662 aa)
	GUK1	Guanylate kinase 1, transcript variant X1. (198 aa)
	ASRGL1	Asparaginase like 1. (316 aa)
	USP45	Ubiquitin carboxyl-terminal hydrolase. (818 aa)
	CUNH8orf37	Uncharacterized protein. (158 aa)
	sws2	Blue-sensitive opsin. (365 aa)
	sws1	Opsin 1 (Cone pigments), short-wave-sensitive. (347 aa)
	RD3	Retinal degeneration 3. (197 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00015351	CUNH8orf37	A0A2I0LGM6	A0A2I0MWK6	Visinin.	Uncharacterized protein.	0.473
A306_00015351	SLC24A2	A0A2I0LGM6	A0A2I0LRL4	Visinin.	Solute carrier family 24 (Sodium/potassium/calcium exchanger), member 2, transcript variant X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.481
A306_00015351	sws1	A0A2I0LGM6	Q9W773	Visinin.	Opsin 1 (Cone pigments), short-wave-sensitive.	0.414
CUNH8orf37	A306_00015351	A0A2I0MWK6	A0A2I0LGM6	Uncharacterized protein.	Visinin.	0.473
GNAT1	GNAT2	A0A2I0LHS3	A0A2I0LZU5	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.900
GNAT1	OPN1LW	A0A2I0LHS3	A0A2I0LHW3	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Opsin 1 (Cone pigments), long-wave-sensitive (Color blindness, protan).	0.438
GNAT1	OPNP	A0A2I0LHS3	A0A2I0LYP2	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Pinopsin.	0.438
GNAT1	sws1	A0A2I0LHS3	Q9W773	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Opsin 1 (Cone pigments), short-wave-sensitive.	0.478
GNAT1	sws2	A0A2I0LHS3	Q9W772	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Blue-sensitive opsin.	0.469
GNAT2	GNAT1	A0A2I0LZU5	A0A2I0LHS3	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.900
GNAT2	OPN1LW	A0A2I0LZU5	A0A2I0LHW3	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Opsin 1 (Cone pigments), long-wave-sensitive (Color blindness, protan).	0.438
GNAT2	OPNP	A0A2I0LZU5	A0A2I0LYP2	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Pinopsin.	0.438
GNAT2	sws1	A0A2I0LZU5	Q9W773	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Opsin 1 (Cone pigments), short-wave-sensitive.	0.564
GNAT2	sws2	A0A2I0LZU5	Q9W772	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Blue-sensitive opsin.	0.469
GNAT3	OPN1LW	A0A2I0MHI2	A0A2I0LHW3	Guanine nucleotide-binding protein G(T) subunit alpha-3.	Opsin 1 (Cone pigments), long-wave-sensitive (Color blindness, protan).	0.438
GNAT3	OPNP	A0A2I0MHI2	A0A2I0LYP2	Guanine nucleotide-binding protein G(T) subunit alpha-3.	Pinopsin.	0.438
GNAT3	sws1	A0A2I0MHI2	Q9W773	Guanine nucleotide-binding protein G(T) subunit alpha-3.	Opsin 1 (Cone pigments), short-wave-sensitive.	0.478
GNAT3	sws2	A0A2I0MHI2	Q9W772	Guanine nucleotide-binding protein G(T) subunit alpha-3.	Blue-sensitive opsin.	0.469
OPN1LW	GNAT1	A0A2I0LHW3	A0A2I0LHS3	Opsin 1 (Cone pigments), long-wave-sensitive (Color blindness, protan).	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.438
OPN1LW	GNAT2	A0A2I0LHW3	A0A2I0LZU5	Opsin 1 (Cone pigments), long-wave-sensitive (Color blindness, protan).	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.438