68 items (Columba livia) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	GNB4	Guanine nucleotide binding protein (G protein), beta polypeptide 4. (340 aa)
	KATNB1	Katanin p80 (WD repeat containing) subunit B 1. (655 aa)
	WDR61	WD repeat domain 61. (305 aa)
	RAE1	Ribonucleic acid export 1, transcript variant X1. (413 aa)
	PWP2	WD_REPEATS_REGION domain-containing protein. (951 aa)
	SMU1	Uncharacterized protein. (499 aa)
	ERCC8	Excision repair cross-complementation group 8, transcript variant X1. (341 aa)
	WDR26	WD repeat domain 26, transcript variant X1. (517 aa)
	WDR44	WD repeat domain 44, transcript variant X1. (923 aa)
	FBXW2	F-box and WD repeat domain containing 2, transcript variant X1. (454 aa)
	WDR5	WD repeat domain 5. (334 aa)
	GNB1	Guanine nucleotide binding protein (G protein), beta polypeptide 1. (340 aa)
	WDR41	WD repeat domain 41. (459 aa)
	WSB2	WD repeat and SOCS box containing 2. (350 aa)
	NLE1	WD_REPEATS_REGION domain-containing protein. (478 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	WSB1	WD repeat and SOCS box containing 1. (422 aa)
	STRN	Striatin, calmodulin binding protein, transcript variant X2. (705 aa)
	STRAP	Serine/threonine kinase receptor associated protein. (309 aa)
	FBXW7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase. (487 aa)
	PLRG1	Pleiotropic regulator 1. (513 aa)
	WDR12	WD repeat domain 12. (290 aa)
	THOC3	THO complex 3. (269 aa)
	POC1B	POC1 centriolar protein B. (426 aa)
	COPB2	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (884 aa)
	APAF1	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. (1248 aa)
	WDR70	WD repeat domain 70. (440 aa)
	ATG16L1	Autophagy related 16-like 1, transcript variant X1. (562 aa)
	TRAF7	TNF receptor-associated factor 7, E3 ubiquitin protein ligase. (670 aa)
	TBL3	Transducin (Beta)-like 3. (881 aa)
	PRPF4	Pre-mRNA processing factor 4. (572 aa)
	WDR31	WD repeat domain 31. (340 aa)
	FBXW11	F-box and WD repeat domain containing 11, transcript variant X3. (531 aa)
	POC1A	POC1 centriolar protein A. (368 aa)
	WDR82	WD repeat domain 82. (313 aa)
	SNRNP40	Small nuclear ribonucleoprotein 40kDa (U5). (348 aa)
	BTRC	Beta-transducin repeat containing E3 ubiquitin protein ligase, transcript variant X1. (633 aa)
	RBBP4	Retinoblastoma binding protein 4. (393 aa)
	COPA	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1224 aa)
	WDR18	WD repeat domain 18. (664 aa)
	A306_00014793	Guanine nucleotide-binding protein subunit beta-2-like 1. (329 aa)
	RRP9	WD_REPEATS_REGION domain-containing protein. (464 aa)
	A306_00015172	F-box/WD repeat-containing protein 7. (357 aa)
	PRPF19	Uncharacterized protein. (336 aa)
	TBL1X	Transducin (Beta)-like 1X-linked, transcript variant X1. (516 aa)
	WDR3	WD repeat domain 3. (938 aa)
	GNB3	Guanine nucleotide binding protein (G protein), beta polypeptide 3. (340 aa)
	RBBP7	Retinoblastoma binding protein 7. (422 aa)
	WDR1	WD repeat domain 1. (620 aa)
	WDR17	WD repeat domain 17, transcript variant X2. (1283 aa)
	STRN3	Striatin, calmodulin binding protein 3, transcript variant X1. (681 aa)
	WDR37	WD repeat domain 37. (495 aa)
	WDR48	WD repeat domain 48. (662 aa)
	WDR86	WD repeat domain 86. (398 aa)
	WDFY2	WD repeat and FYVE domain containing 2. (372 aa)
	PEX7	WD_REPEATS_REGION domain-containing protein. (243 aa)
	TAF5L	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa. (634 aa)
	PAK1IP1	PAK1 interacting protein 1. (381 aa)
	NSMAF	Neutral sphingomyelinase (N-SMase) activation associated factor. (901 aa)
	PWP1	PWP1 homolog, endonuclein. (499 aa)
	WDSUB1	WD repeat, sterile alpha motif and U-box domain containing 1, transcript variant X1. (478 aa)
	TAF5	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa. (634 aa)
	BUB3	BUB3 mitotic checkpoint protein, transcript variant X1. (329 aa)
	GNB5	Guanine nucleotide binding protein (G protein), beta 5. (388 aa)
	WDFY1	WD repeat and FYVE domain containing 1. (462 aa)
	DAW1	Dynein assembly factor with WDR repeat domains 1. (463 aa)
	TBL1XR1	Transducin (Beta)-like 1 X-linked receptor 1, transcript variant X1. (513 aa)
	DTL	WD_REPEATS_REGION domain-containing protein. (685 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00014793	APAF1	A0A2I0LID3	A0A2I0LUL5	Guanine nucleotide-binding protein subunit beta-2-like 1.	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	0.423
A306_00014793	DTL	A0A2I0LID3	A0A2I0MAP7	Guanine nucleotide-binding protein subunit beta-2-like 1.	WD_REPEATS_REGION domain-containing protein.	0.453
A306_00014793	NSMAF	A0A2I0LID3	A0A2I0MX00	Guanine nucleotide-binding protein subunit beta-2-like 1.	Neutral sphingomyelinase (N-SMase) activation associated factor.	0.697
A306_00014793	WDR61	A0A2I0LID3	A0A2I0M6W6	Guanine nucleotide-binding protein subunit beta-2-like 1.	WD repeat domain 61.	0.847
APAF1	A306_00014793	A0A2I0LUL5	A0A2I0LID3	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.423
APAF1	DTL	A0A2I0LUL5	A0A2I0MAP7	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD_REPEATS_REGION domain-containing protein.	0.649
APAF1	ERCC8	A0A2I0LUL5	A0A2I0M554	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Excision repair cross-complementation group 8, transcript variant X1.	0.540
APAF1	WDR31	A0A2I0LUL5	A0A2I0LSY1	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat domain 31.	0.452
BTRC	FBXW11	A0A2I0LP40	A0A2I0LSR6	Beta-transducin repeat containing E3 ubiquitin protein ligase, transcript variant X1.	F-box and WD repeat domain containing 11, transcript variant X3.	0.968
BTRC	FBXW7	A0A2I0LP40	A0A2I0LXT1	Beta-transducin repeat containing E3 ubiquitin protein ligase, transcript variant X1.	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase.	0.932
BUB3	PAFAH1B1	A0A2I0MES4	A0A2I0LYM5	BUB3 mitotic checkpoint protein, transcript variant X1.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	0.586
BUB3	RAE1	A0A2I0MES4	A0A2I0M634	BUB3 mitotic checkpoint protein, transcript variant X1.	Ribonucleic acid export 1, transcript variant X1.	0.519
BUB3	RBBP4	A0A2I0MES4	A0A2I0LNG8	BUB3 mitotic checkpoint protein, transcript variant X1.	Retinoblastoma binding protein 4.	0.429
BUB3	RBBP7	A0A2I0MES4	A0A2I0MLU1	BUB3 mitotic checkpoint protein, transcript variant X1.	Retinoblastoma binding protein 7.	0.429
BUB3	TAF5	A0A2I0MES4	A0A2I0MF13	BUB3 mitotic checkpoint protein, transcript variant X1.	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa.	0.539
BUB3	TAF5L	A0A2I0MES4	A0A2I0MUY5	BUB3 mitotic checkpoint protein, transcript variant X1.	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa.	0.572
BUB3	TBL1X	A0A2I0MES4	A0A2I0MKZ1	BUB3 mitotic checkpoint protein, transcript variant X1.	Transducin (Beta)-like 1X-linked, transcript variant X1.	0.539
BUB3	TBL1XR1	A0A2I0MES4	A0A2I0MBA6	BUB3 mitotic checkpoint protein, transcript variant X1.	Transducin (Beta)-like 1 X-linked receptor 1, transcript variant X1.	0.539
BUB3	WDFY1	A0A2I0MES4	A0A2I0MBN4	BUB3 mitotic checkpoint protein, transcript variant X1.	WD repeat and FYVE domain containing 1.	0.539
BUB3	WDFY2	A0A2I0MES4	A0A2I0MS58	BUB3 mitotic checkpoint protein, transcript variant X1.	WD repeat and FYVE domain containing 2.	0.539