28 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A306_00000373	CASPASE_P20 domain-containing protein. (209 aa)
	A306_00000352	AAA domain-containing protein; Belongs to the AAA ATPase family. (211 aa)
	MALT1	MALT1 paracaspase. (474 aa)
	PSMD1	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 1. (951 aa)
	A306_00013655	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like. (514 aa)
	BTRC	Beta-transducin repeat containing E3 ubiquitin protein ligase, transcript variant X1. (633 aa)
	FBXW11	F-box and WD repeat domain containing 11, transcript variant X3. (531 aa)
	PRKCB	Protein kinase C, beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (634 aa)
	A306_00015329	26S protease regulatory subunit 6B-like. (134 aa)
	RASGRP3	RAS guanyl releasing protein 3 (Calcium and DAG-regulated), transcript variant X1. (693 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (796 aa)
	NRAS	Neuroblastoma RAS viral (V-ras) oncogene homolog. (123 aa)
	CARD11	Caspase recruitment domain family, member 11. (1169 aa)
	NFAT5	Nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X2. (1455 aa)
	CUL1	Cullin 1; Belongs to the cullin family. (776 aa)
	PSMA7	Proteasome endopeptidase complex. (245 aa)
	NFKB1	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1. (959 aa)
	RPS27A	Ribosomal protein S27a. (156 aa)
	PSME4	Proteasome (Prosome, macropain) activator subunit 4. (1823 aa)
	WDR92	WD repeat domain 92. (309 aa)
	SKP1	S-phase kinase-associated protein 1, transcript variant X1; Belongs to the SKP1 family. (163 aa)
	PSMD10	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 10. (217 aa)
	BCL10	B-cell CLL/lymphoma 10. (214 aa)
	HRAS	Uncharacterized protein. (189 aa)
	PSMA1	Proteasome subunit alpha type. (297 aa)
	KRAS	Uncharacterized protein. (197 aa)
	RASGRP1	RAS guanyl releasing protein 1 (Calcium and DAG-regulated). (840 aa)
	PSMC1	Proteasome (Prosome, macropain) 26S subunit, ATPase, 1; Belongs to the AAA ATPase family. (417 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00000352	A306_00015329	A0A2I0LH26	A0A2I0LGE8	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6B-like.	0.900
A306_00000352	CUL1	A0A2I0LH26	A0A2I0M4V6	AAA domain-containing protein; Belongs to the AAA ATPase family.	Cullin 1; Belongs to the cullin family.	0.574
A306_00000352	PSMA1	A0A2I0LH26	A0A2I0MIA6	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.959
A306_00000352	PSMA7	A0A2I0LH26	A0A2I0M655	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome endopeptidase complex.	0.972
A306_00000352	PSMC1	A0A2I0LH26	A0A2I0MQ47	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome (Prosome, macropain) 26S subunit, ATPase, 1; Belongs to the AAA ATPase family.	0.978
A306_00000352	PSMD1	A0A2I0LH26	A0A2I0LMS3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 1.	0.953
A306_00000352	PSMD10	A0A2I0LH26	A0A2I0MAV2	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 10.	0.901
A306_00000352	PSME4	A0A2I0LH26	A0A2I0M9B8	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome (Prosome, macropain) activator subunit 4.	0.655
A306_00000352	RPS27A	A0A2I0LH26	A0A2I0M9A1	AAA domain-containing protein; Belongs to the AAA ATPase family.	Ribosomal protein S27a.	0.894
A306_00000352	SKP1	A0A2I0LH26	A0A2I0MA45	AAA domain-containing protein; Belongs to the AAA ATPase family.	S-phase kinase-associated protein 1, transcript variant X1; Belongs to the SKP1 family.	0.597
A306_00000373	BCL10	A0A2I0LGF4	A0A2I0MDY1	CASPASE_P20 domain-containing protein.	B-cell CLL/lymphoma 10.	0.959
A306_00000373	CARD11	A0A2I0LGF4	A0A2I0M0X0	CASPASE_P20 domain-containing protein.	Caspase recruitment domain family, member 11.	0.876
A306_00013655	BCL10	A0A2I0LNZ0	A0A2I0MDY1	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	B-cell CLL/lymphoma 10.	0.992
A306_00013655	CARD11	A0A2I0LNZ0	A0A2I0M0X0	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Caspase recruitment domain family, member 11.	0.817
A306_00013655	MALT1	A0A2I0LNZ0	A0A2I0LL08	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	MALT1 paracaspase.	0.906
A306_00015329	A306_00000352	A0A2I0LGE8	A0A2I0LH26	26S protease regulatory subunit 6B-like.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.900
A306_00015329	CUL1	A0A2I0LGE8	A0A2I0M4V6	26S protease regulatory subunit 6B-like.	Cullin 1; Belongs to the cullin family.	0.574
A306_00015329	PSMA1	A0A2I0LGE8	A0A2I0MIA6	26S protease regulatory subunit 6B-like.	Proteasome subunit alpha type.	0.959
A306_00015329	PSMA7	A0A2I0LGE8	A0A2I0M655	26S protease regulatory subunit 6B-like.	Proteasome endopeptidase complex.	0.972
A306_00015329	PSMC1	A0A2I0LGE8	A0A2I0MQ47	26S protease regulatory subunit 6B-like.	Proteasome (Prosome, macropain) 26S subunit, ATPase, 1; Belongs to the AAA ATPase family.	0.977