26 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A306_00000182	Uncharacterized protein. (826 aa)
	A306_00000398	Calponin-homology (CH) domain-containing protein. (115 aa)
	A306_00015009	Spectrin beta chain, non-erythrocytic 4. (933 aa)
	A306_00000103	Uncharacterized protein. (409 aa)
	A306_00013675	Receptor-type tyrosine-protein phosphatase T. (650 aa)
	A306_00013673	Putative LOC102098127. (421 aa)
	NCAM1	Neural cell adhesion molecule 1, transcript variant X1. (890 aa)
	SOS1	Uncharacterized protein. (1323 aa)
	GDNF	Glial cell derived neurotrophic factor, transcript variant X1. (218 aa)
	CREB1	cAMP responsive element binding protein 1. (327 aa)
	CNTN2	Contactin 2 (Axonal). (1036 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (796 aa)
	NRAS	Neuroblastoma RAS viral (V-ras) oncogene homolog. (123 aa)
	SPTAN1	Spectrin, alpha, non-erythrocytic 1, transcript variant X1. (2533 aa)
	GRB2	Growth factor receptor-bound protein 2. (250 aa)
	SPTBN1	Spectrin, beta, non-erythrocytic 1. (936 aa)
	PTPRE	Protein tyrosine phosphatase, receptor type, E. (180 aa)
	A306_00006590	Receptor-type tyrosine-protein phosphatase epsilon. (477 aa)
	HRAS	Uncharacterized protein. (189 aa)
	CACNA1I	Calcium channel, voltage-dependent, T type, alpha 1I subunit. (2127 aa)
	KRAS	Uncharacterized protein. (197 aa)
	PTPRA	Receptor-type tyrosine-protein phosphatase alpha. (820 aa)
	SPTBN5	Spectrin, beta, non-erythrocytic 5. (3874 aa)
	RPS6KA5	Ribosomal protein S6 kinase, 90kDa, polypeptide 5. (765 aa)
	NCAM2	Neural cell adhesion molecule 2. (829 aa)
	PTK2	Protein tyrosine kinase 2, transcript variant X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (757 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00000103	A306_00000182	A0A2I0LIG4	A0A2I0LGR9	Uncharacterized protein.	Uncharacterized protein.	0.915
A306_00000103	A306_00000398	A0A2I0LIG4	A0A2I0LH03	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.900
A306_00000103	A306_00015009	A0A2I0LIG4	A0A2I0LHF9	Uncharacterized protein.	Spectrin beta chain, non-erythrocytic 4.	0.908
A306_00000103	SPTAN1	A0A2I0LIG4	A0A2I0M3V0	Uncharacterized protein.	Spectrin, alpha, non-erythrocytic 1, transcript variant X1.	0.844
A306_00000182	A306_00000103	A0A2I0LGR9	A0A2I0LIG4	Uncharacterized protein.	Uncharacterized protein.	0.915
A306_00000182	A306_00000398	A0A2I0LGR9	A0A2I0LH03	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.814
A306_00000182	SPTAN1	A0A2I0LGR9	A0A2I0M3V0	Uncharacterized protein.	Spectrin, alpha, non-erythrocytic 1, transcript variant X1.	0.844
A306_00000398	A306_00000103	A0A2I0LH03	A0A2I0LIG4	Calponin-homology (CH) domain-containing protein.	Uncharacterized protein.	0.900
A306_00000398	A306_00000182	A0A2I0LH03	A0A2I0LGR9	Calponin-homology (CH) domain-containing protein.	Uncharacterized protein.	0.814
A306_00000398	A306_00015009	A0A2I0LH03	A0A2I0LHF9	Calponin-homology (CH) domain-containing protein.	Spectrin beta chain, non-erythrocytic 4.	0.900
A306_00000398	SPTAN1	A0A2I0LH03	A0A2I0M3V0	Calponin-homology (CH) domain-containing protein.	Spectrin, alpha, non-erythrocytic 1, transcript variant X1.	0.859
A306_00006590	GRB2	A0A2I0MET7	A0A2I0M7L1	Receptor-type tyrosine-protein phosphatase epsilon.	Growth factor receptor-bound protein 2.	0.625
A306_00006590	PTPRE	A0A2I0MET7	A0A2I0MEF9	Receptor-type tyrosine-protein phosphatase epsilon.	Protein tyrosine phosphatase, receptor type, E.	0.894
A306_00013673	GRB2	A0A2I0LP16	A0A2I0M7L1	Putative LOC102098127.	Growth factor receptor-bound protein 2.	0.764
A306_00013675	GRB2	A0A2I0LP14	A0A2I0M7L1	Receptor-type tyrosine-protein phosphatase T.	Growth factor receptor-bound protein 2.	0.764
A306_00015009	A306_00000103	A0A2I0LHF9	A0A2I0LIG4	Spectrin beta chain, non-erythrocytic 4.	Uncharacterized protein.	0.908
A306_00015009	A306_00000398	A0A2I0LHF9	A0A2I0LH03	Spectrin beta chain, non-erythrocytic 4.	Calponin-homology (CH) domain-containing protein.	0.900
A306_00015009	SPTAN1	A0A2I0LHF9	A0A2I0M3V0	Spectrin beta chain, non-erythrocytic 4.	Spectrin, alpha, non-erythrocytic 1, transcript variant X1.	0.844
CNTN2	NCAM1	A0A2I0LZW3	A0A2I0LQY7	Contactin 2 (Axonal).	Neural cell adhesion molecule 1, transcript variant X1.	0.641
CNTN2	NCAM2	A0A2I0LZW3	A0A2I0MSJ4	Contactin 2 (Axonal).	Neural cell adhesion molecule 2.	0.641