41 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A306_00011847	Caspase-8, transcript variant X2; Belongs to the peptidase C14A family. (464 aa)
	CFLAR	CASP8 and FADD-like apoptosis regulator, transcript variant X1; Belongs to the peptidase C14A family. (487 aa)
	CALCOCO2	Calcium binding and coiled-coil domain 2. (414 aa)
	WDR31	WD repeat domain 31. (340 aa)
	USP4	Ubiquitin carboxyl-terminal hydrolase. (837 aa)
	ULK2	Unc-51 like autophagy activating kinase 2. (1077 aa)
	MAPKAPK2	Mitogen-activated protein kinase-activated protein kinase 2. (309 aa)
	IKBKE	Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon. (722 aa)
	TRADD	TNFRSF1A-associated via death domain. (306 aa)
	SPATA2	Spermatogenesis associated 2. (523 aa)
	CYLD	Cylindromatosis (Turban tumor syndrome); Belongs to the peptidase C19 family. (949 aa)
	MIB2	Mindbomb E3 ubiquitin protein ligase 2, transcript variant X1. (954 aa)
	TRAF1	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	NAIP	NLR family, apoptosis inhibitory protein. (1432 aa)
	BIRC7	Baculoviral IAP repeat containing 7. (401 aa)
	ULK1	Unc-51 like autophagy activating kinase 1, transcript variant X1. (984 aa)
	UBE2D3	Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. (125 aa)
	RPS27A	Ribosomal protein S27a. (156 aa)
	XIAP	X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase, transcript variant X1. (499 aa)
	BIRC2	Baculoviral IAP repeat containing 2. (611 aa)
	SPPL2A	Signal peptide peptidase like 2A. (531 aa)
	OPTN	Optineurin. (537 aa)
	A306_00000376	DUF4203 domain-containing protein. (323 aa)
	USP2	USP domain-containing protein. (600 aa)
	STUB1	U-box domain-containing protein. (93 aa)
	FADD	Fas (TNFRSF6)-associated via death domain. (195 aa)
	TBK1	TANK-binding kinase 1. (729 aa)
	TNFRSF1A	Tumor necrosis factor receptor superfamily member 1A. (394 aa)
	CASP3	Caspase 3, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (282 aa)
	TAX1BP1	Uncharacterized protein. (816 aa)
	TNFAIP3	Tumor necrosis factor, alpha-induced protein 3. (809 aa)
	FAM105A	Family with sequence similarity 105, member A. (370 aa)
	RIPK1	Receptor (TNFRSF)-interacting serine-threonine kinase 1. (685 aa)
	A306_00001162	Ubiquitin carboxyl-terminal hydrolase CYLD. (823 aa)
	CLIP4	CAP-GLY domain containing linker protein family, member 4. (700 aa)
	TRAF2	TNF receptor-associated factor 2. (350 aa)
	OTUD7B	OTU deubiquitinase 7B. (354 aa)
	SPPL2B	Signal peptide peptidase like 2B. (573 aa)
	A306_00014960	RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (681 aa)
	A306_00013759	Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (272 aa)
	KXD1	KxDL motif containing 1. (135 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00000376	BIRC2	A0A2I0LHL6	A0A2I0MCS5	DUF4203 domain-containing protein.	Baculoviral IAP repeat containing 2.	0.429
A306_00000376	BIRC7	A0A2I0LHL6	A0A2I0M5T2	DUF4203 domain-containing protein.	Baculoviral IAP repeat containing 7.	0.429
A306_00000376	MIB2	A0A2I0LHL6	A0A2I0M320	DUF4203 domain-containing protein.	Mindbomb E3 ubiquitin protein ligase 2, transcript variant X1.	0.620
A306_00000376	NAIP	A0A2I0LHL6	A0A2I0M5H2	DUF4203 domain-containing protein.	NLR family, apoptosis inhibitory protein.	0.429
A306_00000376	XIAP	A0A2I0LHL6	A0A2I0MAS4	DUF4203 domain-containing protein.	X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase, transcript variant X1.	0.429
A306_00001162	A306_00011847	A0A2I0MXZ0	A0A2I0LQ88	Ubiquitin carboxyl-terminal hydrolase CYLD.	Caspase-8, transcript variant X2; Belongs to the peptidase C14A family.	0.914
A306_00001162	A306_00014960	A0A2I0MXZ0	A0A2I0LHY1	Ubiquitin carboxyl-terminal hydrolase CYLD.	RanBP-type and C3HC4-type zinc finger-containing protein 1-like.	0.578
A306_00001162	BIRC2	A0A2I0MXZ0	A0A2I0MCS5	Ubiquitin carboxyl-terminal hydrolase CYLD.	Baculoviral IAP repeat containing 2.	0.577
A306_00001162	BIRC7	A0A2I0MXZ0	A0A2I0M5T2	Ubiquitin carboxyl-terminal hydrolase CYLD.	Baculoviral IAP repeat containing 7.	0.450
A306_00001162	CLIP4	A0A2I0MXZ0	R7VS98	Ubiquitin carboxyl-terminal hydrolase CYLD.	CAP-GLY domain containing linker protein family, member 4.	0.653
A306_00001162	CYLD	A0A2I0MXZ0	A0A2I0M2H6	Ubiquitin carboxyl-terminal hydrolase CYLD.	Cylindromatosis (Turban tumor syndrome); Belongs to the peptidase C19 family.	0.903
A306_00001162	FADD	A0A2I0MXZ0	A0A2I0MI45	Ubiquitin carboxyl-terminal hydrolase CYLD.	Fas (TNFRSF6)-associated via death domain.	0.600
A306_00001162	IKBKE	A0A2I0MXZ0	A0A2I0M078	Ubiquitin carboxyl-terminal hydrolase CYLD.	Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon.	0.958
A306_00001162	MIB2	A0A2I0MXZ0	A0A2I0M320	Ubiquitin carboxyl-terminal hydrolase CYLD.	Mindbomb E3 ubiquitin protein ligase 2, transcript variant X1.	0.936
A306_00001162	NAIP	A0A2I0MXZ0	A0A2I0M5H2	Ubiquitin carboxyl-terminal hydrolase CYLD.	NLR family, apoptosis inhibitory protein.	0.450
A306_00001162	OPTN	A0A2I0MXZ0	A0A2I0MHD3	Ubiquitin carboxyl-terminal hydrolase CYLD.	Optineurin.	0.811
A306_00001162	RIPK1	A0A2I0MXZ0	A0A2I0MXV2	Ubiquitin carboxyl-terminal hydrolase CYLD.	Receptor (TNFRSF)-interacting serine-threonine kinase 1.	0.985
A306_00001162	RPS27A	A0A2I0MXZ0	A0A2I0M9A1	Ubiquitin carboxyl-terminal hydrolase CYLD.	Ribosomal protein S27a.	0.902
A306_00001162	SPATA2	A0A2I0MXZ0	A0A2I0M289	Ubiquitin carboxyl-terminal hydrolase CYLD.	Spermatogenesis associated 2.	0.957
A306_00001162	TBK1	A0A2I0MXZ0	A0A2I0MJ78	Ubiquitin carboxyl-terminal hydrolase CYLD.	TANK-binding kinase 1.	0.600