47 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL17RA	Interleukin 17 receptor A. (969 aa)
	A306_00006786	Actin, cytoplasmic type 5. (376 aa)
	MESDC1	Mesoderm development candidate 1. (355 aa)
	IPCEF1	Interaction protein for cytohesin exchange factors 1. (427 aa)
	CNKSR3	CNKSR family member 3. (588 aa)
	FNDC3A	Fibronectin type III domain containing 3A, transcript variant X1. (1199 aa)
	APBB1IP	Amyloid beta (A4) protein-binding, family B, member 1 interacting protein. (661 aa)
	ITGA8	Integrin, alpha 8; Belongs to the integrin alpha chain family. (1072 aa)
	CNKSR2	Connector enhancer of kinase suppressor of Ras 2. (803 aa)
	VWF	Von Willebrand factor. (2805 aa)
	BRAF	B-Raf proto-oncogene, serine/threonine kinase, transcript variant X1. (754 aa)
	KRAS	Uncharacterized protein. (197 aa)
	RAP1B	RAP1B, member of RAS oncogene family. (184 aa)
	FN1	Fibronectin 1. (2375 aa)
	HRAS	Uncharacterized protein. (189 aa)
	VCL	Vinculin. (1119 aa)
	MAP2K1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
	FNDC3B	Uncharacterized protein. (1154 aa)
	A306_00007551	Connector enhancer of kinase suppressor of ras 2. (1063 aa)
	LAMTOR3	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3. (134 aa)
	TLN2	Talin 2. (1700 aa)
	ACTL7A	Actin-like 7A; Belongs to the actin family. (385 aa)
	A306_00010232	Beta-arrestin-1. (326 aa)
	SRC	SRC proto-oncogene, non-receptor tyrosine kinase. (320 aa)
	YWHAB	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta; Belongs to the 14-3-3 family. (244 aa)
	ACTB	Actin, beta. (375 aa)
	NRAS	Neuroblastoma RAS viral (V-ras) oncogene homolog. (123 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (796 aa)
	RAP1A	RAP1A, member of RAS oncogene family. (128 aa)
	PEBP1	Phosphatidylethanolamine binding protein 1. (195 aa)
	KSR2	Kinase suppressor of ras 2. (903 aa)
	KSR1	Kinase suppressor of ras 1. (534 aa)
	FGG	Fibrinogen gamma chain. (436 aa)
	FGB	Fibrinogen beta chain. (480 aa)
	FGA	Fibrinogen alpha chain. (766 aa)
	RAPH1	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1. (643 aa)
	A306_00009966	Ras-associated and pleckstrin homology domains-containing protein 1-like. (391 aa)
	IL17RD	Interleukin 17 receptor D. (716 aa)
	RAF1	Raf-1 proto-oncogene, serine/threonine kinase. (362 aa)
	PEBP4	Phosphatidylethanolamine-binding protein 4. (314 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (781 aa)
	ARR3	Arrestin 3, retinal (X-arrestin). (362 aa)
	A306_00011441	Fibronectin type-III domain-containing protein 3a-like, transcript variant X1. (1189 aa)
	ITGA2B	Integrin alpha-IIb-like. (176 aa)
	CNKSR1	Connector enhancer of kinase suppressor of Ras 1. (618 aa)
	TLN1	FERM domain-containing protein. (488 aa)
	A306_00000415	Uncharacterized protein. (288 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00000415	A306_00006786	A0A2I0LGB5	R7VXS5	Uncharacterized protein.	Actin, cytoplasmic type 5.	0.429
A306_00000415	A306_00009966	A0A2I0LGB5	A0A2I0LXH6	Uncharacterized protein.	Ras-associated and pleckstrin homology domains-containing protein 1-like.	0.543
A306_00000415	ACTB	A0A2I0LGB5	A0A2I0M0N6	Uncharacterized protein.	Actin, beta.	0.429
A306_00000415	ACTL7A	A0A2I0LGB5	A0A2I0M5E9	Uncharacterized protein.	Actin-like 7A; Belongs to the actin family.	0.429
A306_00000415	APBB1IP	A0A2I0LGB5	A0A2I0MQH1	Uncharacterized protein.	Amyloid beta (A4) protein-binding, family B, member 1 interacting protein.	0.742
A306_00000415	FGB	A0A2I0LGB5	A0A2I0LXU9	Uncharacterized protein.	Fibrinogen beta chain.	0.438
A306_00000415	ITGB3	A0A2I0LGB5	A0A2I0LSC6	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.842
A306_00000415	MAP2K1	A0A2I0LGB5	A0A2I0MD87	Uncharacterized protein.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.426
A306_00000415	RAF1	A0A2I0LGB5	A0A2I0LTX6	Uncharacterized protein.	Raf-1 proto-oncogene, serine/threonine kinase.	0.412
A306_00000415	RAP1A	A0A2I0LGB5	A0A2I0LZS3	Uncharacterized protein.	RAP1A, member of RAS oncogene family.	0.526
A306_00000415	RAP1B	A0A2I0LGB5	A0A2I0MJZ0	Uncharacterized protein.	RAP1B, member of RAS oncogene family.	0.526
A306_00000415	RAPH1	A0A2I0LGB5	A0A2I0LXI7	Uncharacterized protein.	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1.	0.571
A306_00000415	SRC	A0A2I0LGB5	A0A2I0M2A8	Uncharacterized protein.	SRC proto-oncogene, non-receptor tyrosine kinase.	0.622
A306_00000415	TLN1	A0A2I0LGB5	A0A2I0LHT5	Uncharacterized protein.	FERM domain-containing protein.	0.945
A306_00000415	VCL	A0A2I0LGB5	A0A2I0MFM6	Uncharacterized protein.	Vinculin.	0.981
A306_00006786	A306_00000415	R7VXS5	A0A2I0LGB5	Actin, cytoplasmic type 5.	Uncharacterized protein.	0.429
A306_00006786	TLN2	R7VXS5	A0A2I0M6X7	Actin, cytoplasmic type 5.	Talin 2.	0.429
A306_00006786	VCL	R7VXS5	A0A2I0MFM6	Actin, cytoplasmic type 5.	Vinculin.	0.598
A306_00006786	YWHAB	R7VXS5	A0A2I0M285	Actin, cytoplasmic type 5.	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta; Belongs to the 14-3-3 family.	0.411
A306_00007551	BRAF	A0A2I0MAS6	A0A2I0MKF7	Connector enhancer of kinase suppressor of ras 2.	B-Raf proto-oncogene, serine/threonine kinase, transcript variant X1.	0.566