STRINGSTRING
THOC1 THOC1 NCBP1 NCBP1 SDE2 SDE2 A306_00009814 A306_00009814 CSTF2 CSTF2 A306_00009263 A306_00009263 HTATSF1 HTATSF1 RBMX RBMX NUP62CL NUP62CL RBM41 RBM41 A306_00009192 A306_00009192 CARHSP1 CARHSP1 SNRNP25 SNRNP25 LUC7L LUC7L GLE1 GLE1 CUNH9orf78 CUNH9orf78 NUP214 NUP214 NUP188 NUP188 TPRG1L TPRG1L DHX38 DHX38 DHX35 DHX35 A306_00008984 A306_00008984 NCOA5 NCOA5 RALY RALY SRRM3 SRRM3 PRKRIP1 PRKRIP1 POLR2J POLR2J PRPF8 PRPF8 NUP88 NUP88 DHX33 DHX33 CWC27 CWC27 PPWD1 PPWD1 SREK1 SREK1 PCF11 PCF11 CPSF4 CPSF4 BUD31 BUD31 NUDT21 NUDT21 SF3B3 SF3B3 NUP93 NUP93 PPIL1 PPIL1 SRSF3 SRSF3 BCAS2 BCAS2 CPSF6 CPSF6 LSM5 LSM5 SNRPD3 SNRPD3 ZNF318 ZNF318 PLRG1 PLRG1 POLR2B POLR2B SF3B1 SF3B1 RNPS1 RNPS1 THOC3 THOC3 A306_00012273 A306_00012273 NOL8 NOL8 CWC15 CWC15 LSM3 LSM3 EIF4A3 EIF4A3 TRA2B TRA2B WDR53 WDR53 SNRPF SNRPF SEC13 SEC13 NUP210 NUP210 NUP155 NUP155 WDR70 WDR70 POLR2D POLR2D WDR33 WDR33 SNRPG SNRPG TCERG1 TCERG1 A306_00011566 A306_00011566 CUNH20orf196 CUNH20orf196 HNRNPLL HNRNPLL SRSF7 SRSF7 PRPF4 PRPF4 TXNL4A TXNL4A RBM5 RBM5 PCBP4 PCBP4 NXT2 NXT2 SRSF4 SRSF4 SNRNP40 SNRNP40 SF3A3 SF3A3 SNIP1 SNIP1 PPP1R8 PPP1R8 TPR TPR SNRPD1 SNRPD1 RBM6 RBM6 RANBP3L RANBP3L NUP54 NUP54 ZMAT2 ZMAT2 IK IK SF3A2 SF3A2 NUP205 NUP205 BUD13 BUD13 PPIL3 PPIL3 SRSF10 SRSF10 SYF2 SYF2 SRRM1 SRRM1 LSM4 LSM4 SUGP1 SUGP1 SUGP2 SUGP2 RSPRY1 RSPRY1 POLR2C POLR2C NUP98 NUP98 CHERP CHERP FAM32A FAM32A A306_00014132 A306_00014132 DNAJC8 DNAJC8 HNRNPR HNRNPR NSRP1 NSRP1 DHX8 DHX8 A306_00011895 A306_00011895 DDX42 DDX42 CWC25 CWC25 CCDC183 CCDC183 ALYREF ALYREF FYTTD1 FYTTD1 A306_00012749 A306_00012749 ZC3H11A ZC3H11A SNRPE SNRPE HNRNPM HNRNPM CCDC94 CCDC94 SHD SHD THOC5 THOC5 ZMAT5 ZMAT5 CHTOP CHTOP YBX1 YBX1 PPIH PPIH LSM7 LSM7 PCBP3 PCBP3 CASC3 CASC3 YBX3 YBX3 SF3B4 SF3B4 PRPF3 PRPF3 DDX23 DDX23 AAAS AAAS PTBP1 PTBP1 SNRPC SNRPC CIRBP CIRBP CTNNBL1 CTNNBL1 PUF60 PUF60 POLR2E POLR2E RANBP3 RANBP3 PABPN1L PABPN1L SNRNP200 SNRNP200 DQX1 DQX1 CLP1 CLP1 CACTIN CACTIN POLR2I POLR2I USP39 USP39 NUP160 NUP160 A306_00015033 A306_00015033 SF3A1 SF3A1 PRCC PRCC CPSF7 CPSF7 A306_00015258 A306_00015258 A306_00015089 A306_00015089 GTF2F1 GTF2F1 A306_00015341 A306_00015341 POLR2H POLR2H MFAP1 MFAP1 A306_00015207 A306_00015207 A306_00000288 A306_00000288 A306_00015223 A306_00015223 PRPF19 PRPF19 EIF4E1B EIF4E1B XAB2 XAB2 A306_00015217 A306_00015217 A306_00015272 A306_00015272 SNRPD2 SNRPD2 HNRNPAB HNRNPAB SLU7 SLU7 RBM22 RBM22 DDX46 DDX46 THOC2 THOC2 CUNHXorf56 CUNHXorf56 A306_00007600 A306_00007600 UPF3B UPF3B NKAP NKAP U2SURP U2SURP DAW1 DAW1 A306_00007698 A306_00007698 SRSF11 SRSF11 MAGOH MAGOH DHX9 DHX9 NDC1 NDC1 PRPF38A PRPF38A NUP58 NUP58 CWF19L2 CWF19L2 PDCD7 PDCD7 SNRPA1 SNRPA1 PTBP2 PTBP2 RNPC3 RNPC3 DHX32 DHX32 SMNDC1 SMNDC1 HNRNPK HNRNPK PRPF40A PRPF40A LSM6 LSM6 METTL14 METTL14 HNRNPD HNRNPD PRPF18 PRPF18 POLR2L POLR2L CSTF3 CSTF3 A306_00003989 A306_00003989 A306_00003988 A306_00003988 PPIG PPIG HNRNPA3 HNRNPA3 NUP35 NUP35 LSM8 LSM8 POLDIP3 POLDIP3 CSDC2 CSDC2 PHF5A PHF5A ZCRB1 ZCRB1 A306_00004855 A306_00004855 NUP107 NUP107 NUP37 NUP37 PARPBP PARPBP NUP50 NUP50 ZRSR2 ZRSR2 SLBP SLBP A306_00003345 A306_00003345 DHX15 DHX15 FIP1L1 FIP1L1 SLIRP SLIRP RBM25 RBM25 A306_00002026 A306_00002026 SRSF5 SRSF5 PAPOLA PAPOLA CPSF2 CPSF2 PNN PNN WDR25 WDR25 HNRNPA2B1 HNRNPA2B1 NUPL2 NUPL2 CCDC12 CCDC12 TRA2A TRA2A NKTR NKTR WBP4 WBP4 UPF3A UPF3A RANBP2 RANBP2 GTF2F2 GTF2F2 PAXBP1 PAXBP1 ZC3H13 ZC3H13 TXNL4B TXNL4B CDC5L CDC5L SYNCRIP SYNCRIP WTAP WTAP PPIL4 PPIL4 CPSF3 CPSF3 HNRNPU HNRNPU NUP133 NUP133 SF3B6 SF3B6 GCFC2 GCFC2 SF3B5 SF3B5 NUP43 NUP43 LIN28B LIN28B CDC40 CDC40 SNRNP48 SNRNP48 A306_00001702 A306_00001702 NUP153 NUP153 PRPF4B PRPF4B SEH1L SEH1L SMU1 SMU1 POLR2K POLR2K RALYL RALYL RBM17 RBM17 CCAR1 CCAR1 HNRNPH3 HNRNPH3 SNRPB2 SNRPB2 EFTUD2 EFTUD2 WBP11 WBP11 HNRNPH1 HNRNPH1 THOC7 THOC7 A306_00009049 A306_00009049 CRNKL1 CRNKL1 EIF4E EIF4E SNRNP35 SNRNP35 TFIP11 TFIP11 SART3 SART3 PPIL2 PPIL2 GPATCH1 GPATCH1 NUP85 NUP85 SRSF2 SRSF2 LUC7L3 LUC7L3 RAE1 RAE1 CSTF1 CSTF1 PRPF6 PRPF6 A306_00008363 A306_00008363 U2AF1 U2AF1 PTBP3 PTBP3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
THOC1THO complex 1. (649 aa)
NCBP1Nuclear cap binding protein subunit 1, 80kDa. (772 aa)
SDE2Sde2_N_Ubi domain-containing protein. (291 aa)
A306_00009814Ankyrin repeat domain-containing protein 9. (296 aa)
CSTF2Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa. (594 aa)
A306_00009263Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (138 aa)
HTATSF1HIV-1 Tat specific factor 1. (435 aa)
RBMXRNA binding motif protein, X-linked, transcript variant X1. (385 aa)
NUP62CLNucleoporin 62kDa C-terminal like. (347 aa)
RBM41RNA binding motif protein 41. (348 aa)
A306_00009192Nuclear pore glycoprotein p62. (508 aa)
CARHSP1Calcium regulated heat stable protein 1, 24kDa, transcript variant X1. (152 aa)
SNRNP25Small nuclear ribonucleoprotein 25kDa (U11/U12). (103 aa)
LUC7LLUC7-like. (385 aa)
GLE1GLE1 RNA export mediator. (682 aa)
CUNH9orf78Uncharacterized protein. (296 aa)
NUP214Nucleoporin 214kDa. (2026 aa)
NUP188Nucleoporin 188kDa. (1710 aa)
TPRG1LTumor protein p63 regulated 1-like. (275 aa)
DHX38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1088 aa)
DHX35DEAH (Asp-Glu-Ala-His) box polypeptide 35. (685 aa)
A306_00008984Small nuclear ribonucleoprotein-associated protein B'-like. (166 aa)
NCOA5Nuclear receptor coactivator 5. (726 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (281 aa)
SRRM3Serine/arginine repetitive matrix 3. (516 aa)
PRKRIP1PRKR interacting protein 1 (IL11 inducible). (153 aa)
POLR2JPolymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa. (148 aa)
PRPF8Pre-mRNA processing factor 8. (2311 aa)
NUP88Nucleoporin 88kDa. (642 aa)
DHX33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (597 aa)
CWC27CWC27 spliceosome-associated protein homolog. (481 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1, transcript variant X1. (622 aa)
SREK1Splicing regulatory glutamine/lysine-rich protein 1. (457 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1664 aa)
CPSF4Cleavage and polyadenylation specific factor 4, 30kDa. (190 aa)
BUD31BUD31 homolog. (144 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
SF3B3Splicing factor 3b, subunit 3, 130kDa. (1217 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (147 aa)
SRSF3Serine/arginine-rich splicing factor 3, transcript variant X1. (164 aa)
BCAS2Breast carcinoma amplified sequence 2. (161 aa)
CPSF6Cleavage and polyadenylation specific factor 6, 68kDa. (635 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3. (126 aa)
ZNF318Zinc finger protein 318. (1586 aa)
PLRG1Pleiotropic regulator 1. (513 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1167 aa)
SF3B1Splicing factor 3b, subunit 1, 155kDa, transcript variant X3. (1301 aa)
RNPS1RNA binding protein S1, serine-rich domain. (307 aa)
THOC3THO complex 3. (269 aa)
A306_00012273Uncharacterized protein. (391 aa)
NOL8Nucleolar protein 8. (1072 aa)
CWC15CWC15 spliceosome-associated protein. (179 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (109 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (360 aa)
TRA2BRRM domain-containing protein. (189 aa)
WDR53WD repeat domain 53. (354 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (143 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (306 aa)
NUP210Nucleoporin 210kDa. (1841 aa)
NUP155Nucleoporin 155kDa. (1336 aa)
WDR70WD repeat domain 70. (440 aa)
POLR2DPolymerase (RNA) II (DNA directed) polypeptide D. (161 aa)
WDR33WD repeat domain 33, transcript variant X1. (1314 aa)
SNRPGSmall nuclear ribonucleoprotein G. (64 aa)
TCERG1Transcription elongation regulator 1. (990 aa)
A306_00011566Serine/arginine-rich splicing factor 7-like. (303 aa)
CUNH20orf196Uncharacterized protein. (227 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L-like. (410 aa)
SRSF7Serine/arginine-rich splicing factor 7. (299 aa)
PRPF4Pre-mRNA processing factor 4. (572 aa)
TXNL4AThioredoxin-like 4A. (163 aa)
RBM5RNA binding motif protein 5. (806 aa)
PCBP4Poly(RC) binding protein 4. (423 aa)
NXT2Nuclear transport factor 2-like export factor 2. (113 aa)
SRSF4Serine/arginine-rich splicing factor 4. (477 aa)
SNRNP40Small nuclear ribonucleoprotein 40kDa (U5). (348 aa)
SF3A3Splicing factor 3a, subunit 3, 60kDa. (399 aa)
SNIP1Smad nuclear interacting protein 1. (307 aa)
PPP1R8Protein phosphatase 1, regulatory subunit 8. (330 aa)
TPRTranslocated promoter region, nuclear basket protein. (2081 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (112 aa)
RBM6RNA binding motif protein 6, transcript variant X1. (1181 aa)
RANBP3LRAN binding protein 3-like. (534 aa)
NUP54Nucleoporin 54kDa. (512 aa)
ZMAT2Zinc finger, matrin-type 2. (208 aa)
IKIK cytokine, down-regulator of HLA II. (541 aa)
SF3A2Splicing factor 3a, subunit 2, 66kDa. (211 aa)
NUP205Nucleoporin 205kDa. (1118 aa)
BUD13BUD13 homolog. (370 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (199 aa)
SRSF10Serine/arginine-rich splicing factor 10. (303 aa)
SYF2SYF2 pre-mRNA-splicing factor. (217 aa)
SRRM1Serine/arginine repetitive matrix 1, transcript variant X6. (847 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (207 aa)
SUGP1SURP and G patch domain containing 1. (638 aa)
SUGP2SURP and G patch domain containing 2, transcript variant X1. (1102 aa)
RSPRY1Ring finger and SPRY domain containing 1. (569 aa)
POLR2CPolymerase (RNA) II (DNA directed) polypeptide C, 33kDa. (244 aa)
NUP98Nucleoporin 98kDa. (1990 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (785 aa)
FAM32AFamily with sequence similarity 32, member A. (76 aa)
A306_00014132Serine/arginine-rich splicing factor 6. (168 aa)
DNAJC8DnaJ (Hsp40) homolog, subfamily C, member 8. (234 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R, transcript variant X1. (666 aa)
NSRP1Nuclear speckle splicing regulatory protein 1, transcript variant X2. (531 aa)
DHX8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1192 aa)
A306_00011895RING finger protein 113A. (352 aa)
DDX42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (867 aa)
CWC25CWC25 spliceosome-associated protein homolog. (421 aa)
CCDC183Coiled-coil domain containing 183. (441 aa)
ALYREFAly/REF export factor. (279 aa)
FYTTD1Forty-two-three domain containing 1, transcript variant X1. (323 aa)
A306_00012749RNA-binding Raly-like protein. (224 aa)
ZC3H11AZinc finger CCCH-type containing 11A. (802 aa)
SNRPESmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (593 aa)
CCDC94Coiled-coil domain containing 94. (319 aa)
SHDSrc homology 2 domain containing transforming protein D. (240 aa)
THOC5THO complex 5. (600 aa)
ZMAT5Zinc finger, matrin-type 5. (170 aa)
CHTOPChromatin target of PRMT1, transcript variant X1. (248 aa)
YBX1Y box binding protein 1. (248 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (151 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (148 aa)
PCBP3Poly(RC) binding protein 3. (342 aa)
CASC3Cancer susceptibility candidate 3. (635 aa)
YBX3CSP domain-containing protein. (192 aa)
SF3B4Splicing factor 3b, subunit 4, 49kDa. (239 aa)
PRPF3Pre-mRNA processing factor 3. (697 aa)
DDX23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family. (769 aa)
AAASAchalasia, adrenocortical insufficiency, alacrimia. (279 aa)
PTBP1Polypyrimidine tract binding protein 1. (574 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (266 aa)
CIRBPCold inducible RNA binding protein, transcript variant X1. (183 aa)
CTNNBL1Catenin, beta like 1. (818 aa)
PUF60Poly-U binding splicing factor 60KDa. (666 aa)
POLR2EPolymerase (RNA) II (DNA directed) polypeptide E, 25kDa. (139 aa)
RANBP3RAN binding protein 3. (512 aa)
PABPN1LPoly(A) binding protein, nuclear 1-like (Cytoplasmic). (243 aa)
SNRNP200Small nuclear ribonucleoprotein 200kDa (U5). (2105 aa)
DQX1DEAQ box RNA-dependent ATPase 1. (500 aa)
CLP1Cleavage and polyadenylation factor I subunit 1. (208 aa)
CACTINCactin, spliceosome C complex subunit. (750 aa)
POLR2IPolymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa. (90 aa)
USP39Ubiquitin specific peptidase 39. (394 aa)
NUP160Nucleoporin 160kDa. (1156 aa)
A306_00015033Symplekin. (444 aa)
SF3A1Splicing factor 3a, subunit 1, 120kDa. (810 aa)
PRCCPapillary renal cell carcinoma (Translocation-associated). (347 aa)
CPSF7Cleavage and polyadenylation specific factor 7, 59kDa. (203 aa)
A306_00015258Spliceosome RNA helicase DDX39B. (202 aa)
A306_00015089Nuclear pore complex protein Nup153-like. (810 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (214 aa)
A306_00015341Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (100 aa)
POLR2HPolymerase (RNA) II (DNA directed) polypeptide H. (114 aa)
MFAP1Microfibrillar-associated protein 1. (409 aa)
A306_00015207Symplekin-like. (237 aa)
A306_00000288Uncharacterized protein. (569 aa)
A306_00015223Putative LOC102091525. (404 aa)
PRPF19Uncharacterized protein. (336 aa)
EIF4E1BEukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family. (206 aa)
XAB2XPA binding protein 2. (80 aa)
A306_00015217Putative ATP-dependent RNA helicase DHX34. (270 aa)
A306_00015272Cell division cycle 5-like protein. (102 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2. (63 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (262 aa)
SLU7SLU7 homolog, splicing factor, transcript variant X1. (545 aa)
RBM22RNA binding motif protein 22. (420 aa)
DDX46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46; Belongs to the DEAD box helicase family. (776 aa)
THOC2THO complex 2. (1539 aa)
CUNHXorf56Uncharacterized protein. (164 aa)
A306_00007600Pre-mRNA 3'-end-processing factor FIP1. (493 aa)
UPF3BSmg4_UPF3 domain-containing protein. (382 aa)
NKAPNFKB activating protein. (280 aa)
U2SURPU2 snRNP-associated SURP domain containing. (993 aa)
DAW1Dynein assembly factor with WDR repeat domains 1. (463 aa)
A306_00007698Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (161 aa)
SRSF11Serine/arginine-rich splicing factor 11. (421 aa)
MAGOHMago homolog, exon junction complex core component. (102 aa)
DHX9DEAH (Asp-Glu-Ala-His) box helicase 9. (1229 aa)
NDC1NDC1 transmembrane nucleoporin. (647 aa)
PRPF38APre-mRNA processing factor 38A. (310 aa)
NUP58Nucleoporin 58kDa. (604 aa)
CWF19L2Uncharacterized protein. (908 aa)
PDCD7Programmed cell death 7. (261 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (232 aa)
PTBP2Polypyrimidine tract binding protein 2. (349 aa)
RNPC3RNA-binding region (RNP1, RRM) containing 3. (602 aa)
DHX32DEAH (Asp-Glu-Ala-His) box polypeptide 32. (748 aa)
SMNDC1Survival motor neuron domain containing 1, transcript variant X1. (238 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K, transcript variant X2. (428 aa)
PRPF40APRP40 pre-mRNA processing factor 40 homolog A, transcript variant X1. (870 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
METTL14Methyltransferase like 14; Belongs to the MT-A70-like family. (518 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa). (254 aa)
PRPF18Pre-mRNA processing factor 18. (302 aa)
POLR2LPolymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa. (67 aa)
CSTF3Cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa. (713 aa)
A306_00003989Pre-mRNA-splicing factor CWC22 homolog. (496 aa)
A306_00003988Pre-mRNA-splicing factor CWC22 homolog. (423 aa)
PPIGPeptidylprolyl isomerase G (Cyclophilin G), transcript variant X1. (753 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3, transcript variant X1. (391 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (341 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (107 aa)
POLDIP3Polymerase (DNA-directed), delta interacting protein 3. (407 aa)
CSDC2Cold shock domain containing C2, RNA binding. (250 aa)
PHF5APHD finger protein 5A. (99 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif 1. (216 aa)
A306_00004855Putative RNA-binding protein Luc7-like 2. (250 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (510 aa)
NUP37Nucleoporin 37kDa. (326 aa)
PARPBPPARP1 binding protein. (581 aa)
NUP50Nucleoporin 50kDa, transcript variant X1. (471 aa)
ZRSR2Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (375 aa)
SLBPHistone RNA hairpin-binding protein. (295 aa)
A306_00003345Putative LOC102098613, transcript variant X1. (293 aa)
DHX15DEAH (Asp-Glu-Ala-His) box helicase 15. (686 aa)
FIP1L1Factor interacting with PAPOLA and CPSF1. (607 aa)
SLIRPSRA stem-loop interacting RNA binding protein. (103 aa)
RBM25RNA binding motif protein 25, transcript variant X1. (821 aa)
A306_00002026Serine/arginine-rich splicing factor 5. (276 aa)
SRSF5Serine/arginine-rich splicing factor 5, transcript variant X2. (265 aa)
PAPOLAPoly(A) polymerase alpha. (858 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
PNNPinin, desmosome associated protein. (703 aa)
WDR25WD repeat domain 25. (509 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1, transcript variant X1. (378 aa)
NUPL2Nucleoporin like 2. (396 aa)
CCDC12Coiled-coil domain containing 12. (174 aa)
TRA2ARRM domain-containing protein. (174 aa)
NKTRNatural killer cell triggering receptor, transcript variant X3. (1452 aa)
WBP4WW domain binding protein 4. (394 aa)
UPF3ASmg4_UPF3 domain-containing protein. (482 aa)
RANBP2RAN binding protein 2, transcript variant X1. (3073 aa)
GTF2F2General transcription factor IIF, polypeptide 2, 30kDa, transcript variant X2. (322 aa)
PAXBP1PAX3 and PAX7 binding protein 1. (857 aa)
ZC3H13Zinc finger CCCH-type containing 13. (755 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
CDC5LCell division cycle 5-like. (654 aa)
SYNCRIPSynaptotagmin binding, cytoplasmic RNA interacting protein, transcript variant X1. (635 aa)
WTAPWilms tumor 1 associated protein, transcript variant X1. (399 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (483 aa)
CPSF3Cleavage and polyadenylation specific factor 3, 73kDa. (673 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U (Scaffold attachment factor A). (643 aa)
NUP133Nucleoporin 133kDa. (1112 aa)
SF3B6Splicing factor 3b, subunit 6, 14kDa. (125 aa)
GCFC2GC-rich sequence DNA-binding factor 2. (747 aa)
SF3B5Splicing factor 3b, subunit 5, 10kDa. (127 aa)
NUP43Nucleoporin 43kDa. (297 aa)
LIN28BCCHC-type domain-containing protein. (250 aa)
CDC40Cell division cycle 40. (540 aa)
SNRNP48Small nuclear ribonucleoprotein 48kDa (U11/U12). (253 aa)
A306_00001702Poly(RC)-binding protein 3, transcript variant X1. (452 aa)
NUP153Nucleoporin 153kDa. (1281 aa)
PRPF4BPre-mRNA processing factor 4B. (881 aa)
SEH1LSEH1-like nucleoporin; Belongs to the WD repeat SEC13 family. (325 aa)
SMU1Uncharacterized protein. (499 aa)
POLR2KPolymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa. (58 aa)
RALYLRALY RNA binding protein-like. (249 aa)
RBM17RNA binding motif protein 17, transcript variant X1. (401 aa)
CCAR1Cell division cycle and apoptosis regulator protein 1. (1119 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3 (2H9), transcript variant X1. (343 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B. (226 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
WBP11WW domain-binding protein 11. (646 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H1 (H), transcript variant X1. (524 aa)
THOC7THO complex 7. (241 aa)
A306_000090493-oxoacyl-[acyl-carrier-protein] reductase FabG. (297 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (669 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (237 aa)
SNRNP35Small nuclear ribonucleoprotein 35kDa (U11/U12). (323 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (827 aa)
SART3Squamous cell carcinoma antigen recognized by T cells 3. (886 aa)
PPIL2Peptidylprolyl isomerase (Cyclophilin)-like 2. (508 aa)
GPATCH1G patch domain containing 1. (933 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (644 aa)
SRSF2Serine/arginine-rich splicing factor 2. (205 aa)
LUC7L3LUC7-like 3 pre-mRNA splicing factor. (498 aa)
RAE1Ribonucleic acid export 1, transcript variant X1. (413 aa)
CSTF1Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa. (465 aa)
PRPF6Pre-mRNA processing factor 6. (942 aa)
A306_00008363RNA-binding protein Raly. (228 aa)
U2AF1U2 small nuclear RNA auxiliary factor 1, transcript variant X1. (163 aa)
PTBP3Polypyrimidine tract binding protein 3. (197 aa)
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (34%) [HD]