17 items (Columba livia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZDHHC18	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (220 aa)
	GOLGA7	Golgin A7. (363 aa)
	BCL2L1	BCL2-like 1. (230 aa)
	KXD1	KxDL motif containing 1. (135 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (796 aa)
	FNTA	Farnesyltransferase, CAAX box, alpha. (305 aa)
	ABHD17B	Abhydrolase domain containing 17B. (288 aa)
	HRAS	Uncharacterized protein. (189 aa)
	LYPLA1	Lysophospholipase I. (205 aa)
	ZDHHC14	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (495 aa)
	KRAS	Uncharacterized protein. (197 aa)
	NRAS	Neuroblastoma RAS viral (V-ras) oncogene homolog. (123 aa)
	ABHD17C	Abhydrolase domain containing 17C. (310 aa)
	GOLGA7B	Golgin A7 family, member B. (161 aa)
	ICMT	Protein-S-isoprenylcysteine O-methyltransferase. (188 aa)
	A306_00013807	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (305 aa)
	ZDHHC9	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (304 aa)

Your Current Organism:

Columba livia

NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A306_00013807	CSDE1	A0A2I0LL96	A0A2I0LZZ5	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Cold shock domain containing E1, RNA-binding.	0.544
A306_00013807	FNTA	A0A2I0LL96	A0A2I0M6C4	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Farnesyltransferase, CAAX box, alpha.	0.999
A306_00013807	HRAS	A0A2I0LL96	A0A2I0MI00	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Uncharacterized protein.	0.544
A306_00013807	ICMT	A0A2I0LL96	A0A2I0LIN6	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein-S-isoprenylcysteine O-methyltransferase.	0.663
A306_00013807	KRAS	A0A2I0LL96	A0A2I0MKD5	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Uncharacterized protein.	0.544
A306_00013807	NRAS	A0A2I0LL96	A0A2I0LZZ9	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Neuroblastoma RAS viral (V-ras) oncogene homolog.	0.544
ABHD17B	LYPLA1	A0A2I0MFR0	A0A2I0MX87	Abhydrolase domain containing 17B.	Lysophospholipase I.	0.463
ABHD17C	LYPLA1	A0A2I0MDD8	A0A2I0MX87	Abhydrolase domain containing 17C.	Lysophospholipase I.	0.463
BCL2L1	CSDE1	A0A2I0LMZ0	A0A2I0LZZ5	BCL2-like 1.	Cold shock domain containing E1, RNA-binding.	0.594
BCL2L1	HRAS	A0A2I0LMZ0	A0A2I0MI00	BCL2-like 1.	Uncharacterized protein.	0.594
BCL2L1	KRAS	A0A2I0LMZ0	A0A2I0MKD5	BCL2-like 1.	Uncharacterized protein.	0.626
BCL2L1	NRAS	A0A2I0LMZ0	A0A2I0LZZ9	BCL2-like 1.	Neuroblastoma RAS viral (V-ras) oncogene homolog.	0.594
CSDE1	A306_00013807	A0A2I0LZZ5	A0A2I0LL96	Cold shock domain containing E1, RNA-binding.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.544
CSDE1	BCL2L1	A0A2I0LZZ5	A0A2I0LMZ0	Cold shock domain containing E1, RNA-binding.	BCL2-like 1.	0.594
CSDE1	FNTA	A0A2I0LZZ5	A0A2I0M6C4	Cold shock domain containing E1, RNA-binding.	Farnesyltransferase, CAAX box, alpha.	0.477
CSDE1	ICMT	A0A2I0LZZ5	A0A2I0LIN6	Cold shock domain containing E1, RNA-binding.	Protein-S-isoprenylcysteine O-methyltransferase.	0.506
FNTA	A306_00013807	A0A2I0M6C4	A0A2I0LL96	Farnesyltransferase, CAAX box, alpha.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.999
FNTA	CSDE1	A0A2I0M6C4	A0A2I0LZZ5	Farnesyltransferase, CAAX box, alpha.	Cold shock domain containing E1, RNA-binding.	0.477
FNTA	HRAS	A0A2I0M6C4	A0A2I0MI00	Farnesyltransferase, CAAX box, alpha.	Uncharacterized protein.	0.477
FNTA	ICMT	A0A2I0M6C4	A0A2I0LIN6	Farnesyltransferase, CAAX box, alpha.	Protein-S-isoprenylcysteine O-methyltransferase.	0.663