STRINGSTRING
PAPLN PAPLN TFPI TFPI A306_00011310 A306_00011310 APLP2 APLP2 CTNNBL1 CTNNBL1 AMBP AMBP A306_00002599 A306_00002599 COL6A6 COL6A6 SPINT1 SPINT1 TFPI2 TFPI2 APP APP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PAPLNPapilin, proteoglycan-like sulfated glycoprotein. (1347 aa)
TFPITissue factor pathway inhibitor isoform X1. (338 aa)
A306_00011310Collagen alpha-1(VII) chain. (1166 aa)
APLP2Amyloid beta (A4)-like protein 2, transcript variant X1. (710 aa)
CTNNBL1Catenin, beta like 1. (818 aa)
AMBPAlpha-1-microglobulin/bikunin. (445 aa)
A306_00002599Collagen alpha-1(XXVIII) chain-like. (490 aa)
COL6A6Collagen, type VI, alpha 6. (3247 aa)
SPINT1Serine peptidase inhibitor, Kunitz type 1. (506 aa)
TFPI2Tissue factor pathway inhibitor 2. (207 aa)
APPAmyloid beta (A4) protein. (716 aa)
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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