(19 nodes) Mixed, incl. Cytosolic small ribosomal subunit, and Ribosomal protein L23/L15e core domain superfamily network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_013616	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (136 aa)
	ASZ78_003398	WD_REPEATS_REGION domain-containing protein. (317 aa)
	ASZ78_013835	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	ASZ78_011844	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ASZ78_000572	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	ASZ78_007644	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
	ASZ78_004511	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (155 aa)
	ASZ78_008107	Uncharacterized protein. (69 aa)
	ASZ78_015557	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (100 aa)
	ASZ78_010409	TRASH domain-containing protein. (157 aa)
	ASZ78_008961	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	ASZ78_008700	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	ASZ78_001800	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (180 aa)
	ASZ78_014659	40S ribosomal protein S27. (87 aa)
	ASZ78_011777	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (173 aa)
	ASZ78_006800	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	ASZ78_000408	S10_plectin domain-containing protein. (166 aa)
	ASZ78_010028	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (146 aa)
	ASZ78_010284	Ribosomal_L2_C domain-containing protein. (257 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000408	ASZ78_000572	A0A226NLQ7	A0A226MPH8	S10_plectin domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
ASZ78_000408	ASZ78_001800	A0A226NLQ7	A0A226NCB8	S10_plectin domain-containing protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
ASZ78_000408	ASZ78_003398	A0A226NLQ7	A0A226MEQ2	S10_plectin domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
ASZ78_000408	ASZ78_004511	A0A226NLQ7	A0A226MWE1	S10_plectin domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
ASZ78_000408	ASZ78_006800	A0A226NLQ7	A0A226NJN8	S10_plectin domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
ASZ78_000408	ASZ78_007644	A0A226NLQ7	A0A226MUL1	S10_plectin domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
ASZ78_000408	ASZ78_008107	A0A226NLQ7	A0A226MXI9	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
ASZ78_000408	ASZ78_008700	A0A226NLQ7	A0A226NAL5	S10_plectin domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
ASZ78_000408	ASZ78_008961	A0A226NLQ7	A0A226N7R0	S10_plectin domain-containing protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
ASZ78_000408	ASZ78_010028	A0A226NLQ7	A0A226NM27	S10_plectin domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.999
ASZ78_000408	ASZ78_010284	A0A226NLQ7	A0A226NMN5	S10_plectin domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.999
ASZ78_000408	ASZ78_010409	A0A226NLQ7	A0A226N221	S10_plectin domain-containing protein.	TRASH domain-containing protein.	0.999
ASZ78_000408	ASZ78_011777	A0A226NLQ7	A0A226NEE1	S10_plectin domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
ASZ78_000408	ASZ78_011844	A0A226NLQ7	A0A226MIL7	S10_plectin domain-containing protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
ASZ78_000408	ASZ78_013616	A0A226NLQ7	A0A226MDE3	S10_plectin domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ASZ78_000408	ASZ78_013835	A0A226NLQ7	A0A226MGF8	S10_plectin domain-containing protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.999
ASZ78_000408	ASZ78_014659	A0A226NLQ7	A0A226NEA4	S10_plectin domain-containing protein.	40S ribosomal protein S27.	0.999
ASZ78_000408	ASZ78_015557	A0A226NLQ7	A0A226N1P0	S10_plectin domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
ASZ78_000572	ASZ78_000408	A0A226MPH8	A0A226NLQ7	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	S10_plectin domain-containing protein.	0.999
ASZ78_000572	ASZ78_001800	A0A226MPH8	A0A226NCB8	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999