(14 nodes) Mixed, incl. FAD dependent oxidoreductase central domain, and MmgE/PrpD network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_002908	Uncharacterized protein. (594 aa)
	ASZ78_006914	5-aminolevulinate synthase. (635 aa)
	ASZ78_016856	Uncharacterized protein. (467 aa)
	ASZ78_013308	Uncharacterized protein. (442 aa)
	ASZ78_004510	DAO domain-containing protein. (394 aa)
	ASZ78_014424	Uncharacterized protein. (392 aa)
	ASZ78_001720	Epimerase domain-containing protein. (390 aa)
	ASZ78_013738	Uncharacterized protein. (210 aa)
	ASZ78_011208	Uncharacterized protein. (389 aa)
	ASZ78_004157	Pyr_redox_2 domain-containing protein. (396 aa)
	ASZ78_004266	Uncharacterized protein. (866 aa)
	ASZ78_015306	Glycine N-methyltransferase. (294 aa)
	ASZ78_009529	Uncharacterized protein. (311 aa)
	ASZ78_009528	DAO domain-containing protein. (520 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001720	ASZ78_002908	A0A226N311	A0A226MG68	Epimerase domain-containing protein.	Uncharacterized protein.	0.438
ASZ78_001720	ASZ78_004266	A0A226N311	A0A226NFV1	Epimerase domain-containing protein.	Uncharacterized protein.	0.438
ASZ78_001720	ASZ78_006914	A0A226N311	A0A226MSA2	Epimerase domain-containing protein.	5-aminolevulinate synthase.	0.614
ASZ78_001720	ASZ78_009528	A0A226N311	A0A226NNT9	Epimerase domain-containing protein.	DAO domain-containing protein.	0.438
ASZ78_001720	ASZ78_009529	A0A226N311	A0A226NMS3	Epimerase domain-containing protein.	Uncharacterized protein.	0.438
ASZ78_001720	ASZ78_014424	A0A226N311	A0A226N038	Epimerase domain-containing protein.	Uncharacterized protein.	0.986
ASZ78_002908	ASZ78_001720	A0A226MG68	A0A226N311	Uncharacterized protein.	Epimerase domain-containing protein.	0.438
ASZ78_002908	ASZ78_004157	A0A226MG68	A0A226N8P4	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.576
ASZ78_002908	ASZ78_004266	A0A226MG68	A0A226NFV1	Uncharacterized protein.	Uncharacterized protein.	0.682
ASZ78_002908	ASZ78_004510	A0A226MG68	A0A226MW35	Uncharacterized protein.	DAO domain-containing protein.	0.876
ASZ78_002908	ASZ78_006914	A0A226MG68	A0A226MSA2	Uncharacterized protein.	5-aminolevulinate synthase.	0.746
ASZ78_002908	ASZ78_011208	A0A226MG68	A0A226N7K3	Uncharacterized protein.	Uncharacterized protein.	0.576
ASZ78_002908	ASZ78_013308	A0A226MG68	A0A226MVE9	Uncharacterized protein.	Uncharacterized protein.	0.832
ASZ78_002908	ASZ78_013738	A0A226MG68	A0A226N709	Uncharacterized protein.	Uncharacterized protein.	0.537
ASZ78_002908	ASZ78_014424	A0A226MG68	A0A226N038	Uncharacterized protein.	Uncharacterized protein.	0.761
ASZ78_002908	ASZ78_015306	A0A226MG68	A0A226NKV8	Uncharacterized protein.	Glycine N-methyltransferase.	0.742
ASZ78_002908	ASZ78_016856	A0A226MG68	A0A226MTU1	Uncharacterized protein.	Uncharacterized protein.	0.832
ASZ78_004157	ASZ78_002908	A0A226N8P4	A0A226MG68	Pyr_redox_2 domain-containing protein.	Uncharacterized protein.	0.576
ASZ78_004157	ASZ78_004266	A0A226N8P4	A0A226NFV1	Pyr_redox_2 domain-containing protein.	Uncharacterized protein.	0.576
ASZ78_004157	ASZ78_004510	A0A226N8P4	A0A226MW35	Pyr_redox_2 domain-containing protein.	DAO domain-containing protein.	0.827