(12 nodes) Androgen biosynthesis, and 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_005919	Uncharacterized protein. (409 aa)
	ASZ78_000099	S5A_REDUCTASE domain-containing protein. (232 aa)
	ASZ78_004042	Uncharacterized protein. (301 aa)
	ASZ78_004043	Uncharacterized protein. (293 aa)
	ASZ78_001708	S5A_REDUCTASE domain-containing protein. (277 aa)
	ASZ78_014195	3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)). (255 aa)
	ASZ78_016410	Uncharacterized protein. (389 aa)
	ASZ78_006416	Uncharacterized protein. (153 aa)
	ASZ78_007822	Uncharacterized protein; Belongs to the cytochrome P450 family. (408 aa)
	ASZ78_010464	Uncharacterized protein; Belongs to the cytochrome P450 family. (508 aa)
	ASZ78_003073	Uncharacterized protein. (118 aa)
	ASZ78_005374	3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family. (377 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000099	ASZ78_001708	A0A226MEK9	A0A226MHA7	S5A_REDUCTASE domain-containing protein.	S5A_REDUCTASE domain-containing protein.	0.991
ASZ78_000099	ASZ78_003073	A0A226MEK9	A0A226N548	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.960
ASZ78_000099	ASZ78_004042	A0A226MEK9	A0A226MH30	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.493
ASZ78_000099	ASZ78_004043	A0A226MEK9	A0A226MH53	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.493
ASZ78_000099	ASZ78_005374	A0A226MEK9	A0A226NNJ1	S5A_REDUCTASE domain-containing protein.	3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.	0.959
ASZ78_000099	ASZ78_005919	A0A226MEK9	A0A226MCG1	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.925
ASZ78_000099	ASZ78_006416	A0A226MEK9	A0A226MSB6	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.952
ASZ78_000099	ASZ78_007822	A0A226MEK9	A0A226MSF7	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.942
ASZ78_000099	ASZ78_010464	A0A226MEK9	A0A226MSZ7	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.960
ASZ78_000099	ASZ78_014195	A0A226MEK9	A0A226MI08	S5A_REDUCTASE domain-containing protein.	3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)).	0.921
ASZ78_000099	ASZ78_016410	A0A226MEK9	A0A226MPK8	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.565
ASZ78_001708	ASZ78_000099	A0A226MHA7	A0A226MEK9	S5A_REDUCTASE domain-containing protein.	S5A_REDUCTASE domain-containing protein.	0.991
ASZ78_001708	ASZ78_003073	A0A226MHA7	A0A226N548	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.981
ASZ78_001708	ASZ78_004042	A0A226MHA7	A0A226MH30	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.438
ASZ78_001708	ASZ78_004043	A0A226MHA7	A0A226MH53	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.438
ASZ78_001708	ASZ78_005374	A0A226MHA7	A0A226NNJ1	S5A_REDUCTASE domain-containing protein.	3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.	0.982
ASZ78_001708	ASZ78_005919	A0A226MHA7	A0A226MCG1	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.969
ASZ78_001708	ASZ78_006416	A0A226MHA7	A0A226MSB6	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein.	0.952
ASZ78_001708	ASZ78_007822	A0A226MHA7	A0A226MSF7	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.982
ASZ78_001708	ASZ78_010464	A0A226MHA7	A0A226MSZ7	S5A_REDUCTASE domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.981