(6 nodes) Fatty acids, and Aromatic amino acid family biosynthetic process network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014955	Uncharacterized protein. (169 aa)
	ASZ78_016344	Uncharacterized protein. (203 aa)
	ASZ78_003592	Uncharacterized protein. (114 aa)
	ASZ78_013047	Uncharacterized protein. (109 aa)
	ASZ78_014569	Uncharacterized protein. (448 aa)
	ASZ78_014568	DHQ_synthase domain-containing protein. (463 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_003592	ASZ78_014568	A0A226MAX9	A0A226NL86	Uncharacterized protein.	DHQ_synthase domain-containing protein.	0.483
ASZ78_003592	ASZ78_014569	A0A226MAX9	A0A226NL45	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_003592	ASZ78_014955	A0A226MAX9	A0A226M8F9	Uncharacterized protein.	Uncharacterized protein.	0.556
ASZ78_003592	ASZ78_016344	A0A226MAX9	A0A226M8N9	Uncharacterized protein.	Uncharacterized protein.	0.656
ASZ78_013047	ASZ78_014568	A0A226MC33	A0A226NL86	Uncharacterized protein.	DHQ_synthase domain-containing protein.	0.483
ASZ78_013047	ASZ78_014569	A0A226MC33	A0A226NL45	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_013047	ASZ78_014955	A0A226MC33	A0A226M8F9	Uncharacterized protein.	Uncharacterized protein.	0.556
ASZ78_013047	ASZ78_016344	A0A226MC33	A0A226M8N9	Uncharacterized protein.	Uncharacterized protein.	0.650
ASZ78_014568	ASZ78_003592	A0A226NL86	A0A226MAX9	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.483
ASZ78_014568	ASZ78_013047	A0A226NL86	A0A226MC33	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.483
ASZ78_014568	ASZ78_014569	A0A226NL86	A0A226NL45	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.709
ASZ78_014568	ASZ78_014955	A0A226NL86	A0A226M8F9	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.483
ASZ78_014568	ASZ78_016344	A0A226NL86	A0A226M8N9	DHQ_synthase domain-containing protein.	Uncharacterized protein.	0.483
ASZ78_014569	ASZ78_003592	A0A226NL45	A0A226MAX9	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_014569	ASZ78_013047	A0A226NL45	A0A226MC33	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_014569	ASZ78_014568	A0A226NL45	A0A226NL86	Uncharacterized protein.	DHQ_synthase domain-containing protein.	0.709
ASZ78_014569	ASZ78_014955	A0A226NL45	A0A226M8F9	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_014569	ASZ78_016344	A0A226NL45	A0A226M8N9	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_014955	ASZ78_003592	A0A226M8F9	A0A226MAX9	Uncharacterized protein.	Uncharacterized protein.	0.556
ASZ78_014955	ASZ78_013047	A0A226M8F9	A0A226MC33	Uncharacterized protein.	Uncharacterized protein.	0.556