(17 nodes) Mixed, incl. Regulation of neuromuscular junction development, and Negative regulation of amyloid fibril formation network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_000187	Uncharacterized protein. (111 aa)
	ASZ78_000186	Uncharacterized protein. (293 aa)
	ASZ78_008302	Uncharacterized protein. (209 aa)
	ASZ78_008303	Uncharacterized protein. (458 aa)
	ASZ78_016957	Peptidase S72 domain-containing protein. (896 aa)
	ASZ78_007405	Uncharacterized protein. (1112 aa)
	ASZ78_014522	TPR_REGION domain-containing protein. (389 aa)
	ASZ78_006078	Uncharacterized protein. (2594 aa)
	ASZ78_006080	Uncharacterized protein. (1488 aa)
	ASZ78_006075	SEA domain-containing protein. (69 aa)
	ASZ78_001276	NtA domain-containing protein. (181 aa)
	ASZ78_001274	Uncharacterized protein. (1876 aa)
	ASZ78_010501	Uncharacterized protein. (513 aa)
	ASZ78_015680	IRS-type PTB domain-containing protein. (536 aa)
	ASZ78_014960	Uncharacterized protein. (368 aa)
	ASZ78_001692	Uncharacterized protein. (1319 aa)
	ASZ78_004628	Uncharacterized protein; Belongs to the peptidase S1 family. (787 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000186	ASZ78_000187	A0A226MEE4	A0A226MEC2	Uncharacterized protein.	Uncharacterized protein.	0.824
ASZ78_000186	ASZ78_008302	A0A226MEE4	A0A226MG81	Uncharacterized protein.	Uncharacterized protein.	0.590
ASZ78_000186	ASZ78_014522	A0A226MEE4	A0A226MXV9	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.410
ASZ78_000186	ASZ78_014960	A0A226MEE4	A0A226N626	Uncharacterized protein.	Uncharacterized protein.	0.598
ASZ78_000186	ASZ78_015680	A0A226MEE4	A0A226N3H0	Uncharacterized protein.	IRS-type PTB domain-containing protein.	0.430
ASZ78_000187	ASZ78_000186	A0A226MEC2	A0A226MEE4	Uncharacterized protein.	Uncharacterized protein.	0.824
ASZ78_000187	ASZ78_008302	A0A226MEC2	A0A226MG81	Uncharacterized protein.	Uncharacterized protein.	0.590
ASZ78_000187	ASZ78_014522	A0A226MEC2	A0A226MXV9	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.410
ASZ78_000187	ASZ78_014960	A0A226MEC2	A0A226N626	Uncharacterized protein.	Uncharacterized protein.	0.598
ASZ78_000187	ASZ78_015680	A0A226MEC2	A0A226N3H0	Uncharacterized protein.	IRS-type PTB domain-containing protein.	0.430
ASZ78_001274	ASZ78_001276	A0A226N186	A0A226N0F0	Uncharacterized protein.	NtA domain-containing protein.	0.899
ASZ78_001274	ASZ78_001692	A0A226N186	A0A226N9A3	Uncharacterized protein.	Uncharacterized protein.	0.742
ASZ78_001274	ASZ78_004628	A0A226N186	A0A226NHH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.580
ASZ78_001274	ASZ78_007405	A0A226N186	A0A226MVQ0	Uncharacterized protein.	Uncharacterized protein.	0.817
ASZ78_001274	ASZ78_008302	A0A226N186	A0A226MG81	Uncharacterized protein.	Uncharacterized protein.	0.904
ASZ78_001274	ASZ78_010501	A0A226N186	A0A226N3B8	Uncharacterized protein.	Uncharacterized protein.	0.868
ASZ78_001274	ASZ78_014522	A0A226N186	A0A226MXV9	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.868
ASZ78_001274	ASZ78_015680	A0A226N186	A0A226N3H0	Uncharacterized protein.	IRS-type PTB domain-containing protein.	0.700
ASZ78_001274	ASZ78_016957	A0A226N186	A0A226MLQ9	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.968
ASZ78_001276	ASZ78_001274	A0A226N0F0	A0A226N186	NtA domain-containing protein.	Uncharacterized protein.	0.899