(100 nodes) Mixed, incl. RIG-I-like receptor signaling pathway, and CLEC7A (Dectin-1) signaling network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_011692	Uncharacterized protein. (325 aa)
	ASZ78_006162	IKBKB_SDD domain-containing protein. (141 aa)
	ASZ78_016167	Uncharacterized protein. (723 aa)
	ASZ78_000318	Deoxyribonuclease; Belongs to the DNase I family. (306 aa)
	ASZ78_009336	Protein kinase domain-containing protein. (331 aa)
	ASZ78_007167	Protein kinase domain-containing protein. (401 aa)
	ASZ78_011760	Uncharacterized protein. (567 aa)
	ASZ78_007884	ANK_REP_REGION domain-containing protein. (314 aa)
	ASZ78_016494	IRF tryptophan pentad repeat domain-containing protein. (509 aa)
	ASZ78_012743	ANK_REP_REGION domain-containing protein. (318 aa)
	ASZ78_000005	Uncharacterized protein. (187 aa)
	ASZ78_012443	Uncharacterized protein. (876 aa)
	ASZ78_007291	Uncharacterized protein. (303 aa)
	ASZ78_008304	Thioredoxin; Belongs to the thioredoxin family. (105 aa)
	ASZ78_005928	Protein kinase domain-containing protein. (365 aa)
	ASZ78_011041	ANK_REP_REGION domain-containing protein. (814 aa)
	ASZ78_016594	Protein kinase domain-containing protein. (385 aa)
	ASZ78_015502	PPM-type phosphatase domain-containing protein. (409 aa)
	ASZ78_004934	Uncharacterized protein. (641 aa)
	ASZ78_004819	Protein kinase domain-containing protein. (154 aa)
	ASZ78_004820	Protein kinase domain-containing protein. (76 aa)
	ASZ78_004821	SAP domain-containing protein. (844 aa)
	ASZ78_016127	Protein kinase domain-containing protein. (542 aa)
	ASZ78_000013	CCHC NOA-type domain-containing protein. (397 aa)
	ASZ78_009415	Protein kinase domain-containing protein. (755 aa)
	ASZ78_008509	Uncharacterized protein. (606 aa)
	ASZ78_009245	Uncharacterized protein. (317 aa)
	ASZ78_000054	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (502 aa)
	ASZ78_009492	Death domain-containing protein. (311 aa)
	ASZ78_009358	Uncharacterized protein. (198 aa)
	ASZ78_012492	Protein kinase domain-containing protein. (403 aa)
	ASZ78_003614	PPM-type phosphatase domain-containing protein. (296 aa)
	ASZ78_000082	Uncharacterized protein. (505 aa)
	ASZ78_015982	RH1 domain-containing protein. (254 aa)
	ASZ78_015980	RH2 domain-containing protein. (1015 aa)
	ASZ78_009713	Uncharacterized protein. (1242 aa)
	ASZ78_004786	Uncharacterized protein. (452 aa)
	ASZ78_011189	Uncharacterized protein. (980 aa)
	ASZ78_004996	DH domain-containing protein. (1169 aa)
	ASZ78_001870	Uncharacterized protein. (911 aa)
	ASZ78_004512	TNF receptor-associated factor. (470 aa)
	ASZ78_004998	Uncharacterized protein. (366 aa)
	ASZ78_008095	Uncharacterized protein. (780 aa)
	ASZ78_007911	Uncharacterized protein. (382 aa)
	ASZ78_006135	Uncharacterized protein. (622 aa)
	ASZ78_016817	Uncharacterized protein. (795 aa)
	ASZ78_005234	Uncharacterized protein. (658 aa)
	ASZ78_001238	Uncharacterized protein. (827 aa)
	ASZ78_001516	Uncharacterized protein; Belongs to the peptidase C19 family. (732 aa)
	ASZ78_014391	PPM-type phosphatase domain-containing protein. (514 aa)
	ASZ78_011994	Protein kinase domain-containing protein. (391 aa)
	ASZ78_010407	ANK_REP_REGION domain-containing protein. (571 aa)
	ASZ78_002628	Protein kinase domain-containing protein. (452 aa)
	ASZ78_006713	Thioredoxin domain-containing protein. (708 aa)
	ASZ78_007564	Protein kinase domain-containing protein. (1238 aa)
	ASZ78_009858	PPM-type phosphatase domain-containing protein. (745 aa)
	ASZ78_013050	Protein kinase domain-containing protein. (467 aa)
	ASZ78_011241	Uncharacterized protein. (539 aa)
	ASZ78_010788	Uncharacterized protein. (724 aa)
	ASZ78_010808	BAG domain-containing protein. (260 aa)
	ASZ78_014823	IPT/TIG domain-containing protein. (430 aa)
	ASZ78_013736	CARD domain-containing protein. (223 aa)
	ASZ78_006055	Protein kinase domain-containing protein. (937 aa)
	ASZ78_013729	Uncharacterized protein. (491 aa)
	ASZ78_007083	Uncharacterized protein. (284 aa)
	ASZ78_007084	PDZ domain-containing protein. (786 aa)
	ASZ78_016218	Uncharacterized protein. (678 aa)
	ASZ78_001057	Uncharacterized protein. (679 aa)
	ASZ78_002093	Uncharacterized protein. (410 aa)
	ASZ78_001679	Uncharacterized protein. (707 aa)
	ASZ78_004965	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (738 aa)
	ASZ78_006587	Uncharacterized protein. (1081 aa)
	ASZ78_001555	PPM-type phosphatase domain-containing protein. (389 aa)
	ASZ78_005035	ANK_REP_REGION domain-containing protein. (352 aa)
	ASZ78_014831	PPM-type phosphatase domain-containing protein. (526 aa)
	ASZ78_002753	SAM domain-containing protein. (414 aa)
	ASZ78_006630	Mitogen-activated protein kinase. (416 aa)
	ASZ78_002749	Protein kinase domain-containing protein. (176 aa)
	ASZ78_011580	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (175 aa)
	ASZ78_011648	TNF receptor-associated factor. (406 aa)
	ASZ78_013104	ANK_REP_REGION domain-containing protein. (835 aa)
	ASZ78_005689	CARD domain-containing protein. (530 aa)
	ASZ78_010727	CUE domain-containing protein. (697 aa)
	ASZ78_015803	Protein kinase domain-containing protein. (819 aa)
	ASZ78_004681	CARD domain-containing protein. (1070 aa)
	ASZ78_006802	Protein kinase domain-containing protein. (626 aa)
	ASZ78_002793	Protein kinase domain-containing protein. (1241 aa)
	ASZ78_012271	Alpha-type protein kinase domain-containing protein. (1225 aa)
	ASZ78_012273	Uncharacterized protein. (197 aa)
	ASZ78_008659	Protein kinase domain-containing protein. (594 aa)
	ASZ78_014559	PDZ domain-containing protein. (789 aa)
	ASZ78_015284	Non-specific serine/threonine protein kinase; May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. (769 aa)
	ASZ78_010053	Protein kinase domain-containing protein. (1327 aa)
	ASZ78_010058	Uncharacterized protein. (789 aa)
	ASZ78_002253	Uncharacterized protein. (848 aa)
	ASZ78_005361	Uncharacterized protein. (377 aa)
	ASZ78_009607	Uncharacterized protein. (928 aa)
	ASZ78_011368	TBD domain-containing protein. (523 aa)
	ASZ78_004890	Uncharacterized protein. (361 aa)
	ASZ78_004900	Uncharacterized protein. (249 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000005	ASZ78_000054	A0A226ME47	A0A226MR55	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.602
ASZ78_000005	ASZ78_000082	A0A226ME47	A0A226MTZ1	Uncharacterized protein.	Uncharacterized protein.	0.602
ASZ78_000005	ASZ78_004512	A0A226ME47	A0A226MX06	Uncharacterized protein.	TNF receptor-associated factor.	0.602
ASZ78_000005	ASZ78_004890	A0A226ME47	A0A226NQ01	Uncharacterized protein.	Uncharacterized protein.	0.602
ASZ78_000005	ASZ78_007083	A0A226ME47	A0A226N875	Uncharacterized protein.	Uncharacterized protein.	0.602
ASZ78_000005	ASZ78_007084	A0A226ME47	A0A226N8C7	Uncharacterized protein.	PDZ domain-containing protein.	0.602
ASZ78_000005	ASZ78_007291	A0A226ME47	A0A226MFH5	Uncharacterized protein.	Uncharacterized protein.	0.602
ASZ78_000005	ASZ78_011648	A0A226ME47	A0A226NFY8	Uncharacterized protein.	TNF receptor-associated factor.	0.602
ASZ78_000005	ASZ78_014559	A0A226ME47	A0A226NL35	Uncharacterized protein.	PDZ domain-containing protein.	0.602
ASZ78_000013	ASZ78_001870	A0A226MM14	A0A226MX05	CCHC NOA-type domain-containing protein.	Uncharacterized protein.	0.851
ASZ78_000013	ASZ78_004996	A0A226MM14	A0A226MWS2	CCHC NOA-type domain-containing protein.	DH domain-containing protein.	0.646
ASZ78_000013	ASZ78_004998	A0A226MM14	A0A226MX33	CCHC NOA-type domain-containing protein.	Uncharacterized protein.	0.646
ASZ78_000013	ASZ78_005035	A0A226MM14	A0A226NCZ5	CCHC NOA-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.698
ASZ78_000013	ASZ78_005361	A0A226MM14	A0A226NNC5	CCHC NOA-type domain-containing protein.	Uncharacterized protein.	0.954
ASZ78_000013	ASZ78_006162	A0A226MM14	A0A226M971	CCHC NOA-type domain-containing protein.	IKBKB_SDD domain-containing protein.	0.468
ASZ78_000013	ASZ78_007167	A0A226MM14	A0A226MCA0	CCHC NOA-type domain-containing protein.	Protein kinase domain-containing protein.	0.468
ASZ78_000013	ASZ78_010058	A0A226MM14	A0A226NM61	CCHC NOA-type domain-containing protein.	Uncharacterized protein.	0.939
ASZ78_000013	ASZ78_010788	A0A226MM14	A0A226N5A4	CCHC NOA-type domain-containing protein.	Uncharacterized protein.	0.525
ASZ78_000013	ASZ78_011041	A0A226MM14	A0A226MH54	CCHC NOA-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.702
ASZ78_000013	ASZ78_011189	A0A226MM14	A0A226MWL5	CCHC NOA-type domain-containing protein.	Uncharacterized protein.	0.999