(5 nodes) Lipoteichoic acid binding, and Detection of lipopolysaccharide network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_016601	TIR domain-containing protein. (366 aa)
	ASZ78_007905	Uncharacterized protein. (145 aa)
	ASZ78_007906	Uncharacterized protein. (233 aa)
	ASZ78_005610	TIR domain-containing protein. (397 aa)
	ASZ78_012926	Uncharacterized protein. (80 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_005610	ASZ78_007905	A0A226NKH4	A0A226MY88	TIR domain-containing protein.	Uncharacterized protein.	0.634
ASZ78_005610	ASZ78_007906	A0A226NKH4	A0A226MYA7	TIR domain-containing protein.	Uncharacterized protein.	0.634
ASZ78_005610	ASZ78_012926	A0A226NKH4	A0A226NN12	TIR domain-containing protein.	Uncharacterized protein.	0.834
ASZ78_005610	ASZ78_016601	A0A226NKH4	A0A226MCY5	TIR domain-containing protein.	TIR domain-containing protein.	0.675
ASZ78_007905	ASZ78_005610	A0A226MY88	A0A226NKH4	Uncharacterized protein.	TIR domain-containing protein.	0.634
ASZ78_007905	ASZ78_007906	A0A226MY88	A0A226MYA7	Uncharacterized protein.	Uncharacterized protein.	0.821
ASZ78_007905	ASZ78_012926	A0A226MY88	A0A226NN12	Uncharacterized protein.	Uncharacterized protein.	0.972
ASZ78_007905	ASZ78_016601	A0A226MY88	A0A226MCY5	Uncharacterized protein.	TIR domain-containing protein.	0.745
ASZ78_007906	ASZ78_005610	A0A226MYA7	A0A226NKH4	Uncharacterized protein.	TIR domain-containing protein.	0.634
ASZ78_007906	ASZ78_007905	A0A226MYA7	A0A226MY88	Uncharacterized protein.	Uncharacterized protein.	0.821
ASZ78_007906	ASZ78_012926	A0A226MYA7	A0A226NN12	Uncharacterized protein.	Uncharacterized protein.	0.972
ASZ78_007906	ASZ78_016601	A0A226MYA7	A0A226MCY5	Uncharacterized protein.	TIR domain-containing protein.	0.745
ASZ78_012926	ASZ78_005610	A0A226NN12	A0A226NKH4	Uncharacterized protein.	TIR domain-containing protein.	0.834
ASZ78_012926	ASZ78_007905	A0A226NN12	A0A226MY88	Uncharacterized protein.	Uncharacterized protein.	0.972
ASZ78_012926	ASZ78_007906	A0A226NN12	A0A226MYA7	Uncharacterized protein.	Uncharacterized protein.	0.972
ASZ78_012926	ASZ78_016601	A0A226NN12	A0A226MCY5	Uncharacterized protein.	TIR domain-containing protein.	0.983
ASZ78_016601	ASZ78_005610	A0A226MCY5	A0A226NKH4	TIR domain-containing protein.	TIR domain-containing protein.	0.675
ASZ78_016601	ASZ78_007905	A0A226MCY5	A0A226MY88	TIR domain-containing protein.	Uncharacterized protein.	0.745
ASZ78_016601	ASZ78_007906	A0A226MCY5	A0A226MYA7	TIR domain-containing protein.	Uncharacterized protein.	0.745
ASZ78_016601	ASZ78_012926	A0A226MCY5	A0A226NN12	TIR domain-containing protein.	Uncharacterized protein.	0.983