(18 nodes) Mixed, incl. Tiam1/Tiam2/Protein still life, and Invadopodia formation network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_011175	PH domain-containing protein. (683 aa)
	ASZ78_003476	BAR domain-containing protein. (128 aa)
	ASZ78_003483	SH3 domain-containing protein. (942 aa)
	ASZ78_006754	Uncharacterized protein. (2543 aa)
	ASZ78_000691	Uncharacterized protein. (1813 aa)
	ASZ78_011704	Non-specific serine/threonine protein kinase. (1618 aa)
	ASZ78_016188	Uncharacterized protein. (75 aa)
	ASZ78_016187	Uncharacterized protein. (1249 aa)
	ASZ78_013288	PX domain-containing protein. (82 aa)
	ASZ78_013287	Uncharacterized protein. (740 aa)
	ASZ78_010455	Uncharacterized protein. (857 aa)
	ASZ78_000325	Uncharacterized protein. (574 aa)
	ASZ78_015020	Uncharacterized protein. (1739 aa)
	ASZ78_010844	DH domain-containing protein. (314 aa)
	ASZ78_010843	PH domain-containing protein. (124 aa)
	ASZ78_010933	Uncharacterized protein. (986 aa)
	ASZ78_010935	Uncharacterized protein. (668 aa)
	ASZ78_009527	Uncharacterized protein. (746 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000325	ASZ78_000691	A0A226MU35	A0A226MJ62	Uncharacterized protein.	Uncharacterized protein.	0.983
ASZ78_000325	ASZ78_003476	A0A226MU35	A0A226MH76	Uncharacterized protein.	BAR domain-containing protein.	0.463
ASZ78_000325	ASZ78_003483	A0A226MU35	A0A226MH83	Uncharacterized protein.	SH3 domain-containing protein.	0.463
ASZ78_000325	ASZ78_006754	A0A226MU35	A0A226MHF4	Uncharacterized protein.	Uncharacterized protein.	0.985
ASZ78_000325	ASZ78_009527	A0A226MU35	A0A226NNF6	Uncharacterized protein.	Uncharacterized protein.	0.441
ASZ78_000325	ASZ78_010455	A0A226MU35	A0A226MSK4	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_000325	ASZ78_011704	A0A226MU35	A0A226MLU1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.576
ASZ78_000325	ASZ78_013287	A0A226MU35	A0A226MRY3	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_000325	ASZ78_013288	A0A226MU35	A0A226MRR9	Uncharacterized protein.	PX domain-containing protein.	0.674
ASZ78_000691	ASZ78_000325	A0A226MJ62	A0A226MU35	Uncharacterized protein.	Uncharacterized protein.	0.983
ASZ78_000691	ASZ78_003476	A0A226MJ62	A0A226MH76	Uncharacterized protein.	BAR domain-containing protein.	0.463
ASZ78_000691	ASZ78_003483	A0A226MJ62	A0A226MH83	Uncharacterized protein.	SH3 domain-containing protein.	0.463
ASZ78_000691	ASZ78_006754	A0A226MJ62	A0A226MHF4	Uncharacterized protein.	Uncharacterized protein.	0.993
ASZ78_000691	ASZ78_009527	A0A226MJ62	A0A226NNF6	Uncharacterized protein.	Uncharacterized protein.	0.441
ASZ78_000691	ASZ78_010455	A0A226MJ62	A0A226MSK4	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_000691	ASZ78_011704	A0A226MJ62	A0A226MLU1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.576
ASZ78_000691	ASZ78_013287	A0A226MJ62	A0A226MRY3	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_000691	ASZ78_013288	A0A226MJ62	A0A226MRR9	Uncharacterized protein.	PX domain-containing protein.	0.674
ASZ78_003476	ASZ78_000325	A0A226MH76	A0A226MU35	BAR domain-containing protein.	Uncharacterized protein.	0.463
ASZ78_003476	ASZ78_000691	A0A226MH76	A0A226MJ62	BAR domain-containing protein.	Uncharacterized protein.	0.463