(11 nodes) Mixed, incl. Tiam1/Tiam2/Protein still life, and Invadopodia formation network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_011175	PH domain-containing protein. (683 aa)
	ASZ78_011704	Non-specific serine/threonine protein kinase. (1618 aa)
	ASZ78_016188	Uncharacterized protein. (75 aa)
	ASZ78_016187	Uncharacterized protein. (1249 aa)
	ASZ78_013288	PX domain-containing protein. (82 aa)
	ASZ78_013287	Uncharacterized protein. (740 aa)
	ASZ78_010455	Uncharacterized protein. (857 aa)
	ASZ78_015020	Uncharacterized protein. (1739 aa)
	ASZ78_010844	DH domain-containing protein. (314 aa)
	ASZ78_010843	PH domain-containing protein. (124 aa)
	ASZ78_009527	Uncharacterized protein. (746 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_009527	ASZ78_010843	A0A226NNF6	A0A226NG93	Uncharacterized protein.	PH domain-containing protein.	0.589
ASZ78_009527	ASZ78_010844	A0A226NNF6	A0A226NG16	Uncharacterized protein.	DH domain-containing protein.	0.589
ASZ78_009527	ASZ78_011175	A0A226NNF6	A0A226MGF7	Uncharacterized protein.	PH domain-containing protein.	0.982
ASZ78_009527	ASZ78_011704	A0A226NNF6	A0A226MLU1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.416
ASZ78_009527	ASZ78_015020	A0A226NNF6	A0A226N0B8	Uncharacterized protein.	Uncharacterized protein.	0.441
ASZ78_009527	ASZ78_016187	A0A226NNF6	A0A226MMX5	Uncharacterized protein.	Uncharacterized protein.	0.441
ASZ78_009527	ASZ78_016188	A0A226NNF6	A0A226MMV5	Uncharacterized protein.	Uncharacterized protein.	0.441
ASZ78_010455	ASZ78_010843	A0A226MSK4	A0A226NG93	Uncharacterized protein.	PH domain-containing protein.	0.674
ASZ78_010455	ASZ78_010844	A0A226MSK4	A0A226NG16	Uncharacterized protein.	DH domain-containing protein.	0.674
ASZ78_010455	ASZ78_011175	A0A226MSK4	A0A226MGF7	Uncharacterized protein.	PH domain-containing protein.	0.674
ASZ78_010455	ASZ78_011704	A0A226MSK4	A0A226MLU1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.707
ASZ78_010455	ASZ78_013288	A0A226MSK4	A0A226MRR9	Uncharacterized protein.	PX domain-containing protein.	0.913
ASZ78_010455	ASZ78_015020	A0A226MSK4	A0A226N0B8	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_010455	ASZ78_016187	A0A226MSK4	A0A226MMX5	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_010455	ASZ78_016188	A0A226MSK4	A0A226MMV5	Uncharacterized protein.	Uncharacterized protein.	0.674
ASZ78_010843	ASZ78_009527	A0A226NG93	A0A226NNF6	PH domain-containing protein.	Uncharacterized protein.	0.589
ASZ78_010843	ASZ78_010455	A0A226NG93	A0A226MSK4	PH domain-containing protein.	Uncharacterized protein.	0.674
ASZ78_010843	ASZ78_010844	A0A226NG93	A0A226NG16	PH domain-containing protein.	DH domain-containing protein.	0.920
ASZ78_010843	ASZ78_011704	A0A226NG93	A0A226MLU1	PH domain-containing protein.	Non-specific serine/threonine protein kinase.	0.576
ASZ78_010843	ASZ78_013287	A0A226NG93	A0A226MRY3	PH domain-containing protein.	Uncharacterized protein.	0.674