(29 nodes) Mixed, incl. Adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process, and Rho guanine nucleotide exchange factor 10/17 network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_013437	Uncharacterized protein. (166 aa)
	ASZ78_004328	Uncharacterized protein. (267 aa)
	ASZ78_016693	Uncharacterized protein. (826 aa)
	ASZ78_017039	Uncharacterized protein. (217 aa)
	ASZ78_002929	Uncharacterized protein. (307 aa)
	ASZ78_009102	Uncharacterized protein. (423 aa)
	ASZ78_000004	Uncharacterized protein. (269 aa)
	ASZ78_000003	DH domain-containing protein. (594 aa)
	ASZ78_000006	Uncharacterized protein. (189 aa)
	ASZ78_000043	Uncharacterized protein. (444 aa)
	ASZ78_000040	Myosin_tail_1 domain-containing protein. (745 aa)
	ASZ78_016695	Uncharacterized protein. (371 aa)
	ASZ78_012122	Uncharacterized protein. (712 aa)
	ASZ78_012124	Uncharacterized protein. (155 aa)
	ASZ78_012121	PDZ domain-containing protein. (687 aa)
	ASZ78_012117	ETS domain-containing protein. (516 aa)
	ASZ78_001756	Uncharacterized protein; Belongs to the semaphorin family. (602 aa)
	ASZ78_001786	Uncharacterized protein. (1460 aa)
	ASZ78_003256	DH domain-containing protein. (728 aa)
	ASZ78_003257	Uncharacterized protein. (203 aa)
	ASZ78_004771	Uncharacterized protein. (1050 aa)
	ASZ78_005802	Uncharacterized protein. (854 aa)
	ASZ78_005801	Sema domain-containing protein. (914 aa)
	ASZ78_016974	Uncharacterized protein. (807 aa)
	ASZ78_004426	Uncharacterized protein. (1507 aa)
	ASZ78_003719	FERM domain-containing protein. (812 aa)
	ASZ78_015818	Protein kinase domain-containing protein. (620 aa)
	ASZ78_005867	Uncharacterized protein. (246 aa)
	ASZ78_015289	DH domain-containing protein. (710 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000003	ASZ78_000004	A0A226ME72	A0A226ME64	DH domain-containing protein.	Uncharacterized protein.	0.919
ASZ78_000003	ASZ78_000006	A0A226ME72	A0A226MEH3	DH domain-containing protein.	Uncharacterized protein.	0.909
ASZ78_000003	ASZ78_004426	A0A226ME72	A0A226NEG9	DH domain-containing protein.	Uncharacterized protein.	0.485
ASZ78_000003	ASZ78_005867	A0A226ME72	A0A226NLP7	DH domain-containing protein.	Uncharacterized protein.	0.514
ASZ78_000003	ASZ78_012121	A0A226ME72	A0A226MKS0	DH domain-containing protein.	PDZ domain-containing protein.	0.485
ASZ78_000003	ASZ78_012122	A0A226ME72	A0A226MKP6	DH domain-containing protein.	Uncharacterized protein.	0.485
ASZ78_000003	ASZ78_012124	A0A226ME72	A0A226MKQ2	DH domain-containing protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_000003	A0A226ME64	A0A226ME72	Uncharacterized protein.	DH domain-containing protein.	0.919
ASZ78_000004	ASZ78_000006	A0A226ME64	A0A226MEH3	Uncharacterized protein.	Uncharacterized protein.	0.930
ASZ78_000004	ASZ78_004426	A0A226ME64	A0A226NEG9	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_005867	A0A226ME64	A0A226NLP7	Uncharacterized protein.	Uncharacterized protein.	0.514
ASZ78_000004	ASZ78_012121	A0A226ME64	A0A226MKS0	Uncharacterized protein.	PDZ domain-containing protein.	0.485
ASZ78_000004	ASZ78_012122	A0A226ME64	A0A226MKP6	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_012124	A0A226ME64	A0A226MKQ2	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000004	ASZ78_015818	A0A226ME64	A0A226NII4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.493
ASZ78_000006	ASZ78_000003	A0A226MEH3	A0A226ME72	Uncharacterized protein.	DH domain-containing protein.	0.909
ASZ78_000006	ASZ78_000004	A0A226MEH3	A0A226ME64	Uncharacterized protein.	Uncharacterized protein.	0.930
ASZ78_000006	ASZ78_004426	A0A226MEH3	A0A226NEG9	Uncharacterized protein.	Uncharacterized protein.	0.485
ASZ78_000006	ASZ78_005867	A0A226MEH3	A0A226NLP7	Uncharacterized protein.	Uncharacterized protein.	0.514
ASZ78_000006	ASZ78_012121	A0A226MEH3	A0A226MKS0	Uncharacterized protein.	PDZ domain-containing protein.	0.485