(28 nodes) Mixed, incl. Prenylation, and Establishment of protein localization to endoplasmic reticulum membrane network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_006256	Uncharacterized protein. (55 aa)
	ASZ78_000875	Uncharacterized protein. (74 aa)
	ASZ78_001792	Uncharacterized protein. (156 aa)
	ASZ78_011442	Uncharacterized protein. (113 aa)
	ASZ78_011441	Uncharacterized protein. (346 aa)
	ASZ78_010110	Uncharacterized protein. (209 aa)
	ASZ78_005922	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (157 aa)
	ASZ78_010540	Uncharacterized protein. (155 aa)
	ASZ78_011424	Uncharacterized protein. (227 aa)
	ASZ78_001896	Rab-GAP TBC domain-containing protein. (667 aa)
	ASZ78_000545	Uncharacterized protein. (224 aa)
	ASZ78_014036	Uncharacterized protein. (206 aa)
	ASZ78_007712	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (448 aa)
	ASZ78_012883	Uncharacterized protein. (793 aa)
	ASZ78_004504	Uncharacterized protein. (287 aa)
	ASZ78_007841	Uncharacterized protein. (131 aa)
	ASZ78_007842	Uncharacterized protein. (86 aa)
	ASZ78_009344	Uncharacterized protein. (521 aa)
	ASZ78_006858	Uncharacterized protein. (228 aa)
	ASZ78_008737	Uncharacterized protein. (239 aa)
	ASZ78_016973	Uncharacterized protein. (746 aa)
	ASZ78_015807	Uncharacterized protein. (200 aa)
	ASZ78_015914	Uncharacterized protein. (75 aa)
	ASZ78_002796	Uncharacterized protein. (969 aa)
	ASZ78_015214	Uncharacterized protein. (349 aa)
	ASZ78_005490	Rab-GAP TBC domain-containing protein. (351 aa)
	ASZ78_015240	Uncharacterized protein. (1094 aa)
	ASZ78_015745	Uncharacterized protein. (212 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000545	ASZ78_001792	A0A226MPC1	A0A226M7H3	Uncharacterized protein.	Uncharacterized protein.	0.735
ASZ78_000545	ASZ78_001896	A0A226MPC1	A0A226MM70	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.565
ASZ78_000545	ASZ78_004504	A0A226MPC1	A0A226MW88	Uncharacterized protein.	Uncharacterized protein.	0.654
ASZ78_000545	ASZ78_005490	A0A226MPC1	A0A226NKC5	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.782
ASZ78_000545	ASZ78_005922	A0A226MPC1	A0A226MGW6	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.789
ASZ78_000545	ASZ78_006256	A0A226MPC1	A0A226M583	Uncharacterized protein.	Uncharacterized protein.	0.524
ASZ78_000545	ASZ78_006858	A0A226MPC1	A0A226N5Q4	Uncharacterized protein.	Uncharacterized protein.	0.741
ASZ78_000545	ASZ78_007712	A0A226MPC1	A0A226MRU6	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.861
ASZ78_000545	ASZ78_007841	A0A226MPC1	A0A226N3R2	Uncharacterized protein.	Uncharacterized protein.	0.551
ASZ78_000545	ASZ78_007842	A0A226MPC1	A0A226N4G0	Uncharacterized protein.	Uncharacterized protein.	0.524
ASZ78_000545	ASZ78_008737	A0A226MPC1	A0A226NAV4	Uncharacterized protein.	Uncharacterized protein.	0.662
ASZ78_000545	ASZ78_009344	A0A226MPC1	A0A226N577	Uncharacterized protein.	Uncharacterized protein.	0.688
ASZ78_000545	ASZ78_010110	A0A226MPC1	A0A226MFA7	Uncharacterized protein.	Uncharacterized protein.	0.648
ASZ78_000545	ASZ78_010540	A0A226MPC1	A0A226MHQ4	Uncharacterized protein.	Uncharacterized protein.	0.620
ASZ78_000545	ASZ78_011424	A0A226MPC1	A0A226MLS1	Uncharacterized protein.	Uncharacterized protein.	0.451
ASZ78_000545	ASZ78_011441	A0A226MPC1	A0A226MF03	Uncharacterized protein.	Uncharacterized protein.	0.620
ASZ78_000545	ASZ78_011442	A0A226MPC1	A0A226MEZ0	Uncharacterized protein.	Uncharacterized protein.	0.620
ASZ78_000545	ASZ78_014036	A0A226MPC1	A0A226MQ47	Uncharacterized protein.	Uncharacterized protein.	0.432
ASZ78_000545	ASZ78_015214	A0A226MPC1	A0A226NJR4	Uncharacterized protein.	Uncharacterized protein.	0.524
ASZ78_000545	ASZ78_015745	A0A226MPC1	A0A226NNH9	Uncharacterized protein.	Uncharacterized protein.	0.557