(22 nodes) Neurexins and neuroligins network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_001480	Uncharacterized protein. (328 aa)
	ASZ78_005402	LAM_G_DOMAIN domain-containing protein. (146 aa)
	ASZ78_012082	Uncharacterized protein. (903 aa)
	ASZ78_006189	Uncharacterized protein. (340 aa)
	ASZ78_006196	COesterase domain-containing protein. (868 aa)
	ASZ78_000525	Uncharacterized protein. (260 aa)
	ASZ78_007849	Uncharacterized protein. (168 aa)
	ASZ78_007850	ANK_REP_REGION domain-containing protein. (74 aa)
	ASZ78_003258	Uncharacterized protein. (264 aa)
	ASZ78_014473	Uncharacterized protein. (135 aa)
	ASZ78_012332	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (433 aa)
	ASZ78_006525	SH3 domain-containing protein. (160 aa)
	ASZ78_006524	ANK_REP_REGION domain-containing protein. (451 aa)
	ASZ78_006526	Uncharacterized protein. (953 aa)
	ASZ78_010873	COesterase domain-containing protein. (851 aa)
	ASZ78_008179	COesterase domain-containing protein. (598 aa)
	ASZ78_007378	Uncharacterized protein. (503 aa)
	ASZ78_011507	4.1m domain-containing protein. (348 aa)
	ASZ78_011506	LAM_G_DOMAIN domain-containing protein. (221 aa)
	ASZ78_011917	Uncharacterized protein. (972 aa)
	ASZ78_007493	Uncharacterized protein. (429 aa)
	ASZ78_007494	Uncharacterized protein. (532 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000525	ASZ78_001480	A0A226MI07	A0A226MBS8	Uncharacterized protein.	Uncharacterized protein.	0.916
ASZ78_000525	ASZ78_003258	A0A226MI07	A0A226MSV2	Uncharacterized protein.	Uncharacterized protein.	0.772
ASZ78_000525	ASZ78_005402	A0A226MI07	A0A226MBX5	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.553
ASZ78_000525	ASZ78_006189	A0A226MI07	A0A226MFZ7	Uncharacterized protein.	Uncharacterized protein.	0.916
ASZ78_000525	ASZ78_006196	A0A226MI07	A0A226MG25	Uncharacterized protein.	COesterase domain-containing protein.	0.603
ASZ78_000525	ASZ78_006524	A0A226MI07	A0A226N6N4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.684
ASZ78_000525	ASZ78_006525	A0A226MI07	A0A226N6K9	Uncharacterized protein.	SH3 domain-containing protein.	0.711
ASZ78_000525	ASZ78_006526	A0A226MI07	A0A226N6T0	Uncharacterized protein.	Uncharacterized protein.	0.658
ASZ78_000525	ASZ78_007493	A0A226MI07	A0A226NFP2	Uncharacterized protein.	Uncharacterized protein.	0.584
ASZ78_000525	ASZ78_007494	A0A226MI07	A0A226NFX6	Uncharacterized protein.	Uncharacterized protein.	0.855
ASZ78_000525	ASZ78_007849	A0A226MI07	A0A226MJ52	Uncharacterized protein.	Uncharacterized protein.	0.689
ASZ78_000525	ASZ78_007850	A0A226MI07	A0A226MJ80	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.689
ASZ78_000525	ASZ78_008179	A0A226MI07	A0A226NAF4	Uncharacterized protein.	COesterase domain-containing protein.	0.603
ASZ78_000525	ASZ78_010873	A0A226MI07	A0A226N871	Uncharacterized protein.	COesterase domain-containing protein.	0.603
ASZ78_000525	ASZ78_011506	A0A226MI07	A0A226NDK8	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.553
ASZ78_000525	ASZ78_011507	A0A226MI07	A0A226NDK3	Uncharacterized protein.	4.1m domain-containing protein.	0.553
ASZ78_000525	ASZ78_011917	A0A226MI07	A0A226NFH8	Uncharacterized protein.	Uncharacterized protein.	0.671
ASZ78_000525	ASZ78_012082	A0A226MI07	A0A226MD03	Uncharacterized protein.	Uncharacterized protein.	0.689
ASZ78_000525	ASZ78_014473	A0A226MI07	A0A226MWV7	Uncharacterized protein.	Uncharacterized protein.	0.553
ASZ78_001480	ASZ78_000525	A0A226MBS8	A0A226MI07	Uncharacterized protein.	Uncharacterized protein.	0.916