(23 nodes) Transcription coactivator binding network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_013235	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (670 aa)
	ASZ78_009317	POU domain protein. (754 aa)
	ASZ78_000613	Uncharacterized protein. (745 aa)
	ASZ78_002624	Uncharacterized protein. (864 aa)
	ASZ78_006478	Uncharacterized protein. (683 aa)
	ASZ78_008962	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1660 aa)
	ASZ78_004975	Uncharacterized protein. (546 aa)
	ASZ78_012778	Uncharacterized protein. (466 aa)
	ASZ78_003730	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1184 aa)
	ASZ78_013546	BTB domain-containing protein. (68 aa)
	ASZ78_010247	Uncharacterized protein. (261 aa)
	ASZ78_003898	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2247 aa)
	ASZ78_002795	Cyclin N-terminal domain-containing protein. (767 aa)
	ASZ78_000398	Uncharacterized protein. (443 aa)
	ASZ78_006384	Uncharacterized protein. (294 aa)
	ASZ78_013262	NR LBD domain-containing protein. (216 aa)
	ASZ78_013264	NR LBD domain-containing protein. (122 aa)
	ASZ78_004357	Uncharacterized protein. (2454 aa)
	ASZ78_004211	Mothers against decapentaplegic homolog. (479 aa)
	ASZ78_006159	GATA-type domain-containing protein. (165 aa)
	ASZ78_003038	Uncharacterized protein. (186 aa)
	ASZ78_011164	Uncharacterized protein. (742 aa)
	ASZ78_000952	Uncharacterized protein. (2345 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000398	ASZ78_000952	A0A226NLP2	A0A226MYG1	Uncharacterized protein.	Uncharacterized protein.	0.466
ASZ78_000398	ASZ78_004357	A0A226NLP2	A0A226MGM4	Uncharacterized protein.	Uncharacterized protein.	0.466
ASZ78_000398	ASZ78_008962	A0A226NLP2	A0A226N7Z3	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.680
ASZ78_000398	ASZ78_013235	A0A226NLP2	A0A226MX92	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.680
ASZ78_000613	ASZ78_000952	A0A226MP19	A0A226MYG1	Uncharacterized protein.	Uncharacterized protein.	0.948
ASZ78_000613	ASZ78_004357	A0A226MP19	A0A226MGM4	Uncharacterized protein.	Uncharacterized protein.	0.949
ASZ78_000613	ASZ78_011164	A0A226MP19	A0A226N0R9	Uncharacterized protein.	Uncharacterized protein.	0.823
ASZ78_000952	ASZ78_000398	A0A226MYG1	A0A226NLP2	Uncharacterized protein.	Uncharacterized protein.	0.466
ASZ78_000952	ASZ78_000613	A0A226MYG1	A0A226MP19	Uncharacterized protein.	Uncharacterized protein.	0.948
ASZ78_000952	ASZ78_003038	A0A226MYG1	A0A226MB43	Uncharacterized protein.	Uncharacterized protein.	0.948
ASZ78_000952	ASZ78_004211	A0A226MYG1	A0A226MF11	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.804
ASZ78_000952	ASZ78_004357	A0A226MYG1	A0A226MGM4	Uncharacterized protein.	Uncharacterized protein.	0.997
ASZ78_000952	ASZ78_004975	A0A226MYG1	A0A226NA23	Uncharacterized protein.	Uncharacterized protein.	0.742
ASZ78_000952	ASZ78_006159	A0A226MYG1	A0A226MCN2	Uncharacterized protein.	GATA-type domain-containing protein.	0.730
ASZ78_000952	ASZ78_006478	A0A226MYG1	A0A226N5Y7	Uncharacterized protein.	Uncharacterized protein.	0.833
ASZ78_000952	ASZ78_008962	A0A226MYG1	A0A226N7Z3	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.708
ASZ78_000952	ASZ78_009317	A0A226MYG1	A0A226MX68	Uncharacterized protein.	POU domain protein.	0.637
ASZ78_000952	ASZ78_011164	A0A226MYG1	A0A226N0R9	Uncharacterized protein.	Uncharacterized protein.	0.965
ASZ78_000952	ASZ78_012778	A0A226MYG1	A0A226NA98	Uncharacterized protein.	Uncharacterized protein.	0.715
ASZ78_000952	ASZ78_013235	A0A226MYG1	A0A226MX92	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.708