(74 nodes) Fibrillar center network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_004108	RPA_interact_M domain-containing protein. (108 aa)
	ASZ78_012709	NOSIC domain-containing protein. (261 aa)
	ASZ78_014771	Uncharacterized protein. (69 aa)
	ASZ78_006507	MH1 domain-containing protein. (192 aa)
	ASZ78_015008	Nop domain-containing protein. (221 aa)
	ASZ78_008673	MH2 domain-containing protein. (207 aa)
	ASZ78_002866	LisH domain-containing protein. (1241 aa)
	ASZ78_012227	Uncharacterized protein. (931 aa)
	ASZ78_007683	Kinase; Belongs to the inositol phosphokinase (IPK) family. (417 aa)
	ASZ78_009501	Uncharacterized protein. (282 aa)
	ASZ78_002609	Protein kinase domain-containing protein. (300 aa)
	ASZ78_006761	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (326 aa)
	ASZ78_005816	Uncharacterized protein. (175 aa)
	ASZ78_008503	C2H2-type domain-containing protein. (457 aa)
	ASZ78_005812	Uncharacterized protein. (991 aa)
	ASZ78_015607	WD_REPEATS_REGION domain-containing protein. (512 aa)
	ASZ78_011698	Uncharacterized protein. (521 aa)
	ASZ78_003935	Protein kinase domain-containing protein. (714 aa)
	ASZ78_008506	Uncharacterized protein. (126 aa)
	ASZ78_006989	Uncharacterized protein. (362 aa)
	ASZ78_008291	Uncharacterized protein. (190 aa)
	ASZ78_008264	Uncharacterized protein. (302 aa)
	ASZ78_009481	Uncharacterized protein. (136 aa)
	ASZ78_007814	Uncharacterized protein. (658 aa)
	ASZ78_009855	Rho-GAP domain-containing protein. (1652 aa)
	ASZ78_005981	Coilin_N domain-containing protein. (388 aa)
	ASZ78_007552	WD_REPEATS_REGION domain-containing protein. (369 aa)
	ASZ78_007548	Uncharacterized protein. (777 aa)
	ASZ78_007551	Uncharacterized protein. (136 aa)
	ASZ78_002644	Mothers against decapentaplegic homolog. (363 aa)
	ASZ78_007402	BP28CT domain-containing protein. (1916 aa)
	ASZ78_004801	LisH domain-containing protein. (1026 aa)
	ASZ78_012391	WD_REPEATS_REGION domain-containing protein. (593 aa)
	ASZ78_001874	LisH domain-containing protein. (609 aa)
	ASZ78_004512	TNF receptor-associated factor. (470 aa)
	ASZ78_001999	Uncharacterized protein. (1057 aa)
	ASZ78_008087	Uncharacterized protein. (312 aa)
	ASZ78_013803	Ig-like domain-containing protein. (575 aa)
	ASZ78_008095	Uncharacterized protein. (780 aa)
	ASZ78_009731	PID domain-containing protein. (690 aa)
	ASZ78_016817	Uncharacterized protein. (795 aa)
	ASZ78_001097	Uncharacterized protein. (265 aa)
	ASZ78_010197	TAFH domain-containing protein. (705 aa)
	ASZ78_011993	Uncharacterized protein. (1092 aa)
	ASZ78_015081	Uncharacterized protein. (666 aa)
	ASZ78_015082	Uncharacterized protein. (117 aa)
	ASZ78_011256	WD_REPEATS_REGION domain-containing protein. (629 aa)
	ASZ78_009385	Uncharacterized protein. (409 aa)
	ASZ78_008921	Homeobox domain-containing protein. (264 aa)
	ASZ78_008823	Uncharacterized protein. (127 aa)
	ASZ78_015664	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (352 aa)
	ASZ78_002898	Homeobox protein engrailed-like. (329 aa)
	ASZ78_002109	Uncharacterized protein. (1145 aa)
	ASZ78_005933	Nop domain-containing protein. (563 aa)
	ASZ78_010005	Uncharacterized protein. (267 aa)
	ASZ78_016279	Uncharacterized protein. (220 aa)
	ASZ78_008755	Uncharacterized protein. (340 aa)
	ASZ78_008375	WD_REPEATS_REGION domain-containing protein. (688 aa)
	ASZ78_005053	RPOLD domain-containing protein. (290 aa)
	ASZ78_005035	ANK_REP_REGION domain-containing protein. (352 aa)
	ASZ78_011773	Elp3 domain-containing protein. (356 aa)
	ASZ78_006631	Uncharacterized protein. (2206 aa)
	ASZ78_006632	Uncharacterized protein. (324 aa)
	ASZ78_006653	Uncharacterized protein. (841 aa)
	ASZ78_013005	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (776 aa)
	ASZ78_000640	Uncharacterized protein. (155 aa)
	ASZ78_004257	Uncharacterized protein. (312 aa)
	ASZ78_011585	Uncharacterized protein. (713 aa)
	ASZ78_004625	CHCH domain-containing protein. (155 aa)
	ASZ78_015205	Ribosomal_L7Ae domain-containing protein. (290 aa)
	ASZ78_010348	Uncharacterized protein. (268 aa)
	ASZ78_015305	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1023 aa)
	ASZ78_014302	Uncharacterized protein. (2062 aa)
	ASZ78_015704	Protein kinase domain-containing protein. (644 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000640	ASZ78_005053	A0A226NF58	A0A226NCV4	Uncharacterized protein.	RPOLD domain-containing protein.	0.438
ASZ78_000640	ASZ78_009385	A0A226NF58	A0A226N5L9	Uncharacterized protein.	Uncharacterized protein.	0.496
ASZ78_000640	ASZ78_015664	A0A226NF58	A0A226N7S3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.586
ASZ78_001874	ASZ78_005053	A0A226MWZ2	A0A226NCV4	LisH domain-containing protein.	RPOLD domain-containing protein.	0.773
ASZ78_001874	ASZ78_005933	A0A226MWZ2	A0A226N9Q8	LisH domain-containing protein.	Nop domain-containing protein.	0.986
ASZ78_001874	ASZ78_005981	A0A226MWZ2	A0A226MSS7	LisH domain-containing protein.	Coilin_N domain-containing protein.	0.613
ASZ78_001874	ASZ78_007402	A0A226MWZ2	A0A226MV56	LisH domain-containing protein.	BP28CT domain-containing protein.	0.446
ASZ78_001874	ASZ78_008375	A0A226MWZ2	A0A226NC92	LisH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.522
ASZ78_001874	ASZ78_009385	A0A226MWZ2	A0A226N5L9	LisH domain-containing protein.	Uncharacterized protein.	0.588
ASZ78_001874	ASZ78_011256	A0A226MWZ2	A0A226N534	LisH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.857
ASZ78_001874	ASZ78_012709	A0A226MWZ2	A0A226M6Z2	LisH domain-containing protein.	NOSIC domain-containing protein.	0.954
ASZ78_001874	ASZ78_015008	A0A226MWZ2	A0A226MCX5	LisH domain-containing protein.	Nop domain-containing protein.	0.954
ASZ78_001874	ASZ78_015205	A0A226MWZ2	A0A226NJ54	LisH domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.602
ASZ78_001874	ASZ78_015305	A0A226MWZ2	A0A226NKY5	LisH domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.891
ASZ78_001999	ASZ78_005053	A0A226MXF4	A0A226NCV4	Uncharacterized protein.	RPOLD domain-containing protein.	0.512
ASZ78_001999	ASZ78_005933	A0A226MXF4	A0A226N9Q8	Uncharacterized protein.	Nop domain-containing protein.	0.672
ASZ78_001999	ASZ78_007402	A0A226MXF4	A0A226MV56	Uncharacterized protein.	BP28CT domain-containing protein.	0.538
ASZ78_001999	ASZ78_008375	A0A226MXF4	A0A226NC92	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.485
ASZ78_001999	ASZ78_011256	A0A226MXF4	A0A226N534	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.567
ASZ78_001999	ASZ78_015205	A0A226MXF4	A0A226NJ54	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.415