(51 nodes) Memory network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_012082	Uncharacterized protein. (903 aa)
	ASZ78_013227	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (235 aa)
	ASZ78_002157	SSD domain-containing protein. (635 aa)
	ASZ78_009406	Uncharacterized protein. (678 aa)
	ASZ78_004467	Uncharacterized protein. (322 aa)
	ASZ78_006460	Uncharacterized protein. (114 aa)
	ASZ78_002445	ABC transmembrane type-1 domain-containing protein. (480 aa)
	ASZ78_009298	Uncharacterized protein. (193 aa)
	ASZ78_007603	BTB domain-containing protein. (483 aa)
	ASZ78_011824	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (349 aa)
	ASZ78_011999	Uncharacterized protein. (411 aa)
	ASZ78_012000	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (175 aa)
	ASZ78_001772	Uncharacterized protein. (665 aa)
	ASZ78_014709	Uncharacterized protein. (431 aa)
	ASZ78_009530	DOMON domain-containing protein. (672 aa)
	ASZ78_011411	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (885 aa)
	ASZ78_009138	Uncharacterized protein. (425 aa)
	ASZ78_002501	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (489 aa)
	ASZ78_007850	ANK_REP_REGION domain-containing protein. (74 aa)
	ASZ78_007849	Uncharacterized protein. (168 aa)
	ASZ78_011846	Uncharacterized protein. (1066 aa)
	ASZ78_005735	Uncharacterized protein. (183 aa)
	ASZ78_016367	AXH domain-containing protein. (798 aa)
	ASZ78_006761	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (326 aa)
	ASZ78_001526	Arc_C domain-containing protein. (404 aa)
	ASZ78_014411	Uncharacterized protein. (675 aa)
	ASZ78_010222	EF-hand domain-containing protein; Belongs to the S-100 family. (92 aa)
	ASZ78_004577	Fork-head domain-containing protein. (589 aa)
	ASZ78_003190	Uncharacterized protein. (1215 aa)
	ASZ78_009471	TPR_REGION domain-containing protein. (190 aa)
	ASZ78_000894	Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (591 aa)
	ASZ78_001014	SSD domain-containing protein. (888 aa)
	ASZ78_008048	Spatacsin_C domain-containing protein. (2171 aa)
	ASZ78_006525	SH3 domain-containing protein. (160 aa)
	ASZ78_006524	ANK_REP_REGION domain-containing protein. (451 aa)
	ASZ78_001921	Uncharacterized protein. (481 aa)
	ASZ78_008824	BH4_AAA_HYDROXYL_2 domain-containing protein. (491 aa)
	ASZ78_008912	GLUCAGON domain-containing protein. (167 aa)
	ASZ78_004143	Uncharacterized protein. (114 aa)
	ASZ78_002082	Homeobox protein cut-like. (1519 aa)
	ASZ78_004755	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1231 aa)
	ASZ78_005944	Uncharacterized protein. (346 aa)
	ASZ78_008394	AXH domain-containing protein. (691 aa)
	ASZ78_014116	Fibronectin type-III domain-containing protein. (782 aa)
	ASZ78_015443	Uncharacterized protein. (1557 aa)
	ASZ78_005737	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1336 aa)
	ASZ78_002609	Protein kinase domain-containing protein. (300 aa)
	ASZ78_001102	AAA domain-containing protein; Belongs to the AAA ATPase family. (397 aa)
	ASZ78_005549	YTH domain-containing protein. (547 aa)
	ASZ78_015393	Uncharacterized protein. (489 aa)
	ASZ78_014922	Uncharacterized protein. (429 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000894	ASZ78_002609	A0A226N5Y2	A0A226MH74	Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Protein kinase domain-containing protein.	0.703
ASZ78_000894	ASZ78_006761	A0A226N5Y2	A0A226MHF3	Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.703
ASZ78_001102	ASZ78_011999	A0A226MH34	A0A226MMK1	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.423
ASZ78_001102	ASZ78_012000	A0A226MH34	A0A226MMH2	AAA domain-containing protein; Belongs to the AAA ATPase family.	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.423
ASZ78_001526	ASZ78_001921	A0A226N0G8	A0A226N6Z6	Arc_C domain-containing protein.	Uncharacterized protein.	0.540
ASZ78_001772	ASZ78_005944	A0A226MM42	A0A226N9X6	Uncharacterized protein.	Uncharacterized protein.	0.841
ASZ78_001921	ASZ78_001526	A0A226N6Z6	A0A226N0G8	Uncharacterized protein.	Arc_C domain-containing protein.	0.540
ASZ78_001921	ASZ78_011824	A0A226N6Z6	A0A226MQ96	Uncharacterized protein.	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.	0.457
ASZ78_002082	ASZ78_008394	A0A226N9H8	A0A226NC59	Homeobox protein cut-like.	AXH domain-containing protein.	0.446
ASZ78_002445	ASZ78_005944	A0A226MTD3	A0A226N9X6	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.443
ASZ78_002445	ASZ78_009138	A0A226MTD3	A0A226MJT3	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.508
ASZ78_002445	ASZ78_014922	A0A226MTD3	A0A226MEH0	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.454
ASZ78_002609	ASZ78_000894	A0A226MH74	A0A226N5Y2	Protein kinase domain-containing protein.	Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	0.703
ASZ78_002609	ASZ78_004755	A0A226MH74	A0A226N9N4	Protein kinase domain-containing protein.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.716
ASZ78_002609	ASZ78_005944	A0A226MH74	A0A226N9X6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.804
ASZ78_002609	ASZ78_006761	A0A226MH74	A0A226MHF3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.802
ASZ78_002609	ASZ78_011999	A0A226MH74	A0A226MMK1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.404
ASZ78_002609	ASZ78_012000	A0A226MH74	A0A226MMH2	Protein kinase domain-containing protein.	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.404
ASZ78_004755	ASZ78_002609	A0A226N9N4	A0A226MH74	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Protein kinase domain-containing protein.	0.716
ASZ78_004755	ASZ78_006761	A0A226N9N4	A0A226MHF3	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.716