(21 nodes) Motor neuron axon guidance network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_010905	Uncharacterized protein. (1462 aa)
	ASZ78_014567	Fork-head domain-containing protein. (569 aa)
	ASZ78_009754	Uncharacterized protein. (352 aa)
	ASZ78_009133	Uncharacterized protein. (196 aa)
	ASZ78_009132	Uncharacterized protein. (507 aa)
	ASZ78_014786	Uncharacterized protein. (606 aa)
	ASZ78_007104	Uncharacterized protein. (1172 aa)
	ASZ78_014311	Uncharacterized protein. (357 aa)
	ASZ78_006927	Uncharacterized protein; Belongs to the semaphorin family. (789 aa)
	ASZ78_006938	Uncharacterized protein; Belongs to the semaphorin family. (659 aa)
	ASZ78_005984	Noggin; Belongs to the noggin family. (223 aa)
	ASZ78_013314	Uncharacterized protein. (2000 aa)
	ASZ78_007799	Uncharacterized protein. (587 aa)
	ASZ78_007176	Uncharacterized protein. (378 aa)
	ASZ78_016899	Uncharacterized protein. (508 aa)
	ASZ78_003361	Uncharacterized protein; Belongs to the semaphorin family. (568 aa)
	ASZ78_014216	Uncharacterized protein. (191 aa)
	ASZ78_003694	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (224 aa)
	ASZ78_000822	Uncharacterized protein. (191 aa)
	ASZ78_005682	Uncharacterized protein. (395 aa)
	ASZ78_016643	Uncharacterized protein. (191 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000822	ASZ78_003361	A0A226MF06	A0A226N666	Uncharacterized protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.416
ASZ78_000822	ASZ78_006938	A0A226MF06	A0A226MS68	Uncharacterized protein.	Uncharacterized protein; Belongs to the semaphorin family.	0.416
ASZ78_000822	ASZ78_014216	A0A226MF06	A0A226N7U9	Uncharacterized protein.	Uncharacterized protein.	0.459
ASZ78_000822	ASZ78_016643	A0A226MF06	A0A226MDG2	Uncharacterized protein.	Uncharacterized protein.	0.910
ASZ78_003361	ASZ78_000822	A0A226N666	A0A226MF06	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.416
ASZ78_003361	ASZ78_003694	A0A226N666	A0A226N9F0	Uncharacterized protein; Belongs to the semaphorin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.794
ASZ78_003361	ASZ78_007799	A0A226N666	A0A226MVL1	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.566
ASZ78_003361	ASZ78_009132	A0A226N666	A0A226MFP7	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.547
ASZ78_003361	ASZ78_009133	A0A226N666	A0A226MF30	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.547
ASZ78_003361	ASZ78_014786	A0A226N666	A0A226MGT8	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.566
ASZ78_003361	ASZ78_016643	A0A226N666	A0A226MDG2	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.416
ASZ78_003694	ASZ78_003361	A0A226N9F0	A0A226N666	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the semaphorin family.	0.794
ASZ78_003694	ASZ78_006927	A0A226N9F0	A0A226MS57	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the semaphorin family.	0.448
ASZ78_003694	ASZ78_006938	A0A226N9F0	A0A226MS68	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the semaphorin family.	0.625
ASZ78_005682	ASZ78_009754	A0A226NIN6	A0A226NB76	Uncharacterized protein.	Uncharacterized protein.	0.491
ASZ78_005682	ASZ78_014311	A0A226NIN6	A0A226MNE0	Uncharacterized protein.	Uncharacterized protein.	0.460
ASZ78_006927	ASZ78_003694	A0A226MS57	A0A226N9F0	Uncharacterized protein; Belongs to the semaphorin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.448
ASZ78_006927	ASZ78_007799	A0A226MS57	A0A226MVL1	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.511
ASZ78_006927	ASZ78_009132	A0A226MS57	A0A226MFP7	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.435
ASZ78_006927	ASZ78_009133	A0A226MS57	A0A226MF30	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.435