(60 nodes) Peptide transport network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014501	Ig-like domain-containing protein. (560 aa)
	ASZ78_015744	Uncharacterized protein. (424 aa)
	ASZ78_004885	Uncharacterized protein. (801 aa)
	ASZ78_002283	Uncharacterized protein. (1436 aa)
	ASZ78_015255	SSD domain-containing protein. (1504 aa)
	ASZ78_016656	Uncharacterized protein. (597 aa)
	ASZ78_016667	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (579 aa)
	ASZ78_016657	NR LBD domain-containing protein. (103 aa)
	ASZ78_016763	Uncharacterized protein. (500 aa)
	ASZ78_010853	GLUCAGON domain-containing protein. (235 aa)
	ASZ78_012997	GLUCAGON domain-containing protein. (172 aa)
	ASZ78_002751	Uncharacterized protein. (447 aa)
	ASZ78_002750	Uncharacterized protein. (391 aa)
	ASZ78_015045	Uncharacterized protein. (747 aa)
	ASZ78_007280	Uncharacterized protein. (201 aa)
	ASZ78_007282	MFS domain-containing protein. (213 aa)
	ASZ78_008715	Homeobox domain-containing protein. (634 aa)
	ASZ78_008182	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (347 aa)
	ASZ78_009745	HNF-1_N domain-containing protein. (268 aa)
	ASZ78_009746	HNF-1B_C domain-containing protein. (194 aa)
	ASZ78_003652	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (143 aa)
	ASZ78_003651	G_PROTEIN_RECEP_F2_3 domain-containing protein. (189 aa)
	ASZ78_002036	Uncharacterized protein. (794 aa)
	ASZ78_016211	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (566 aa)
	ASZ78_005192	Uncharacterized protein. (273 aa)
	ASZ78_003365	C2 domain-containing protein. (375 aa)
	ASZ78_006813	Uncharacterized protein. (354 aa)
	ASZ78_014169	Neurogenic differentiation factor. (357 aa)
	ASZ78_015353	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (898 aa)
	ASZ78_010513	Uncharacterized protein. (1400 aa)
	ASZ78_006718	Uncharacterized protein. (963 aa)
	ASZ78_012252	Uncharacterized protein. (657 aa)
	ASZ78_001517	BZIP domain-containing protein. (286 aa)
	ASZ78_003788	Uncharacterized protein. (523 aa)
	ASZ78_005246	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (548 aa)
	ASZ78_015583	Uncharacterized protein. (81 aa)
	ASZ78_015584	GLUCAGON domain-containing protein. (104 aa)
	ASZ78_012312	Uncharacterized protein. (205 aa)
	ASZ78_001182	Uncharacterized protein. (690 aa)
	ASZ78_004987	DJ-1_PfpI domain-containing protein. (189 aa)
	ASZ78_004472	ANK_REP_REGION domain-containing protein. (301 aa)
	ASZ78_004470	Ion_trans domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (582 aa)
	ASZ78_008626	Uncharacterized protein. (198 aa)
	ASZ78_000228	Uncharacterized protein. (467 aa)
	ASZ78_000229	Uncharacterized protein. (145 aa)
	ASZ78_007677	Uncharacterized protein. (943 aa)
	ASZ78_000539	G_PROTEIN_RECEP_F1_2 domain-containing protein. (319 aa)
	ASZ78_013592	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (84 aa)
	ASZ78_013590	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (317 aa)
	ASZ78_006451	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. (328 aa)
	ASZ78_016458	Uncharacterized protein. (157 aa)
	ASZ78_014554	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (398 aa)
	ASZ78_005305	G_PROTEIN_RECEP_F1_2 domain-containing protein. (229 aa)
	ASZ78_013606	Annexin. (308 aa)
	ASZ78_013340	Uncharacterized protein. (452 aa)
	ASZ78_007242	Uncharacterized protein. (216 aa)
	ASZ78_005756	Uncharacterized protein. (728 aa)
	ASZ78_005760	Uncharacterized protein. (462 aa)
	ASZ78_000047	ABC transmembrane type-1 domain-containing protein. (144 aa)
	ASZ78_003028	ABC transmembrane type-1 domain-containing protein. (128 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000047	ASZ78_004987	A0A226M9W4	A0A226MXD4	ABC transmembrane type-1 domain-containing protein.	DJ-1_PfpI domain-containing protein.	0.426
ASZ78_000047	ASZ78_005756	A0A226M9W4	A0A226MCN9	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.969
ASZ78_000228	ASZ78_015744	A0A226MQY5	A0A226NPH1	Uncharacterized protein.	Uncharacterized protein.	0.908
ASZ78_000539	ASZ78_010853	A0A226MPH5	A0A226NGA5	G_PROTEIN_RECEP_F1_2 domain-containing protein.	GLUCAGON domain-containing protein.	0.737
ASZ78_000539	ASZ78_015583	A0A226MPH5	A0A226MZM6	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.655
ASZ78_000539	ASZ78_015584	A0A226MPH5	A0A226MZI8	G_PROTEIN_RECEP_F1_2 domain-containing protein.	GLUCAGON domain-containing protein.	0.655
ASZ78_001182	ASZ78_016667	A0A226MY05	A0A226NKN5	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.490
ASZ78_002036	ASZ78_004987	A0A226N916	A0A226MXD4	Uncharacterized protein.	DJ-1_PfpI domain-containing protein.	0.426
ASZ78_002036	ASZ78_005756	A0A226N916	A0A226MCN9	Uncharacterized protein.	Uncharacterized protein.	0.967
ASZ78_002283	ASZ78_002750	A0A226NN73	A0A226NE66	Uncharacterized protein.	Uncharacterized protein.	0.515
ASZ78_002283	ASZ78_002751	A0A226NN73	A0A226NE69	Uncharacterized protein.	Uncharacterized protein.	0.515
ASZ78_002283	ASZ78_004987	A0A226NN73	A0A226MXD4	Uncharacterized protein.	DJ-1_PfpI domain-containing protein.	0.510
ASZ78_002283	ASZ78_006451	A0A226NN73	A0A226MLZ8	Uncharacterized protein.	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.	0.630
ASZ78_002750	ASZ78_002283	A0A226NE66	A0A226NN73	Uncharacterized protein.	Uncharacterized protein.	0.515
ASZ78_002750	ASZ78_002751	A0A226NE66	A0A226NE69	Uncharacterized protein.	Uncharacterized protein.	0.934
ASZ78_002750	ASZ78_003365	A0A226NE66	A0A226N661	Uncharacterized protein.	C2 domain-containing protein.	0.816
ASZ78_002750	ASZ78_010513	A0A226NE66	A0A226N3N4	Uncharacterized protein.	Uncharacterized protein.	0.515
ASZ78_002751	ASZ78_002283	A0A226NE69	A0A226NN73	Uncharacterized protein.	Uncharacterized protein.	0.515
ASZ78_002751	ASZ78_002750	A0A226NE69	A0A226NE66	Uncharacterized protein.	Uncharacterized protein.	0.934
ASZ78_002751	ASZ78_003365	A0A226NE69	A0A226N661	Uncharacterized protein.	C2 domain-containing protein.	0.816