27 items (Callipepla squamata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_009110	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (126 aa)
	ASZ78_000572	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	ASZ78_013591	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (613 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1249 aa)
	ASZ78_005418	Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (180 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (296 aa)
	ASZ78_011844	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ASZ78_006752	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (112 aa)
	ASZ78_013616	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (136 aa)
	ASZ78_002541	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	ASZ78_003056	Ribosomal_S17_N domain-containing protein. (79 aa)
	ASZ78_002223	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (286 aa)
	ASZ78_000446	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (93 aa)
	ASZ78_012844	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	ASZ78_000445	Uncharacterized protein. (149 aa)
	ASZ78_010028	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (146 aa)
	ASZ78_000408	S10_plectin domain-containing protein. (166 aa)
	ASZ78_015796	Uncharacterized protein. (505 aa)
	ASZ78_011777	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (173 aa)
	ASZ78_014659	40S ribosomal protein S27. (87 aa)
	ASZ78_001668	Uncharacterized protein. (103 aa)
	ASZ78_013278	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (276 aa)
	ASZ78_014470	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	ASZ78_008107	Uncharacterized protein. (69 aa)
	ASZ78_004808	Uncharacterized protein. (115 aa)
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
	ASZ78_007644	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000408	ASZ78_000445	A0A226NLQ7	A0A226NM89	S10_plectin domain-containing protein.	Uncharacterized protein.	0.996
ASZ78_000408	ASZ78_000446	A0A226NLQ7	A0A226NMY5	S10_plectin domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.996
ASZ78_000408	ASZ78_000572	A0A226NLQ7	A0A226MPH8	S10_plectin domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
ASZ78_000408	ASZ78_001668	A0A226NLQ7	A0A226N970	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
ASZ78_000408	ASZ78_002223	A0A226NLQ7	A0A226NN21	S10_plectin domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
ASZ78_000408	ASZ78_002541	A0A226NLQ7	A0A226M7S0	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.997
ASZ78_000408	ASZ78_003056	A0A226NLQ7	A0A226M712	S10_plectin domain-containing protein.	Ribosomal_S17_N domain-containing protein.	0.997
ASZ78_000408	ASZ78_004808	A0A226NLQ7	A0A226MWR2	S10_plectin domain-containing protein.	Uncharacterized protein.	0.996
ASZ78_000408	ASZ78_005418	A0A226NLQ7	A0A226MJM9	S10_plectin domain-containing protein.	Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
ASZ78_000408	ASZ78_006752	A0A226NLQ7	A0A226MHF7	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.997
ASZ78_000408	ASZ78_007644	A0A226NLQ7	A0A226MUL1	S10_plectin domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
ASZ78_000408	ASZ78_008107	A0A226NLQ7	A0A226MXI9	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
ASZ78_000408	ASZ78_009110	A0A226NLQ7	A0A226MQC9	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.985
ASZ78_000408	ASZ78_010028	A0A226NLQ7	A0A226NM27	S10_plectin domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.999
ASZ78_000408	ASZ78_011777	A0A226NLQ7	A0A226NEE1	S10_plectin domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
ASZ78_000408	ASZ78_011844	A0A226NLQ7	A0A226MIL7	S10_plectin domain-containing protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
ASZ78_000408	ASZ78_012844	A0A226NLQ7	A0A226NMH9	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
ASZ78_000408	ASZ78_013278	A0A226NLQ7	A0A226N863	S10_plectin domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
ASZ78_000408	ASZ78_013616	A0A226NLQ7	A0A226MDE3	S10_plectin domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ASZ78_000408	ASZ78_014470	A0A226NLQ7	A0A226N4F0	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999