(65 nodes) Cortical actin cytoskeleton network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_006527	SH3 domain-containing protein. (523 aa)
	ASZ78_006521	Uncharacterized protein. (4492 aa)
	ASZ78_008349	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (666 aa)
	ASZ78_006233	Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (123 aa)
	ASZ78_014836	Uncharacterized protein. (1470 aa)
	ASZ78_005037	Uncharacterized protein. (218 aa)
	ASZ78_014652	Uncharacterized protein. (282 aa)
	ASZ78_008599	FERM domain-containing protein. (576 aa)
	ASZ78_002748	Uncharacterized protein. (1363 aa)
	ASZ78_004619	Uncharacterized protein. (1175 aa)
	ASZ78_010263	Uncharacterized protein. (828 aa)
	ASZ78_013548	WD_REPEATS_REGION domain-containing protein. (565 aa)
	ASZ78_016706	Uncharacterized protein. (764 aa)
	ASZ78_002176	Uncharacterized protein. (1053 aa)
	ASZ78_009611	Uncharacterized protein. (2885 aa)
	ASZ78_005356	WD_REPEATS_REGION domain-containing protein. (456 aa)
	ASZ78_013464	ASD1 domain-containing protein. (306 aa)
	ASZ78_006232	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (701 aa)
	ASZ78_004227	Uncharacterized protein. (394 aa)
	ASZ78_001529	ASD2 domain-containing protein. (111 aa)
	ASZ78_010438	Uncharacterized protein. (251 aa)
	ASZ78_016176	Uncharacterized protein. (130 aa)
	ASZ78_013506	Uncharacterized protein. (231 aa)
	ASZ78_003032	Uncharacterized protein. (654 aa)
	ASZ78_009644	ADF-H domain-containing protein. (76 aa)
	ASZ78_013413	Uncharacterized protein. (802 aa)
	ASZ78_001410	Uncharacterized protein. (483 aa)
	ASZ78_012477	Calponin-homology (CH) domain-containing protein. (38 aa)
	ASZ78_003372	ASD2 domain-containing protein. (209 aa)
	ASZ78_005916	PH domain-containing protein. (1885 aa)
	ASZ78_015234	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1000 aa)
	ASZ78_003284	Uncharacterized protein. (453 aa)
	ASZ78_016588	ASD1 domain-containing protein. (604 aa)
	ASZ78_016589	Uncharacterized protein. (470 aa)
	ASZ78_016115	ADF-H domain-containing protein. (130 aa)
	ASZ78_001805	PH domain-containing protein. (876 aa)
	ASZ78_005811	Uncharacterized protein. (1323 aa)
	ASZ78_003092	Spectrin beta chain; Belongs to the spectrin family. (2307 aa)
	ASZ78_007856	SH3 domain-containing protein. (347 aa)
	ASZ78_007855	Uncharacterized protein. (2852 aa)
	ASZ78_000283	Uncharacterized protein. (660 aa)
	ASZ78_012687	Uncharacterized protein. (545 aa)
	ASZ78_011401	Uncharacterized protein. (1142 aa)
	ASZ78_009680	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (163 aa)
	ASZ78_009682	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1643 aa)
	ASZ78_006427	LLGL domain-containing protein. (852 aa)
	ASZ78_007266	PH domain-containing protein. (129 aa)
	ASZ78_007263	Uncharacterized protein. (177 aa)
	ASZ78_007264	Uncharacterized protein. (2092 aa)
	ASZ78_007267	Uncharacterized protein. (84 aa)
	ASZ78_007265	Uncharacterized protein. (557 aa)
	ASZ78_016395	IMD domain-containing protein. (716 aa)
	ASZ78_010170	PH domain-containing protein. (599 aa)
	ASZ78_010162	Uncharacterized protein. (1742 aa)
	ASZ78_007028	FERM domain-containing protein. (648 aa)
	ASZ78_004509	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (428 aa)
	ASZ78_000971	Uncharacterized protein. (288 aa)
	ASZ78_017013	Uncharacterized protein. (829 aa)
	ASZ78_017012	Cobl domain-containing protein. (225 aa)
	ASZ78_000862	CTLH domain-containing protein. (262 aa)
	ASZ78_006085	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (479 aa)
	ASZ78_003749	ADF-H domain-containing protein. (561 aa)
	ASZ78_002716	Gasdermin domain-containing protein. (322 aa)
	ASZ78_000716	RabBD domain-containing protein. (712 aa)
	ASZ78_015360	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (216 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001410	ASZ78_005037	A0A226MBK5	A0A226NDK1	Uncharacterized protein.	Uncharacterized protein.	0.787
ASZ78_001410	ASZ78_007265	A0A226MBK5	A0A226MMP2	Uncharacterized protein.	Uncharacterized protein.	0.634
ASZ78_001410	ASZ78_009611	A0A226MBK5	A0A226NMZ6	Uncharacterized protein.	Uncharacterized protein.	0.858
ASZ78_001410	ASZ78_010438	A0A226MBK5	A0A226M7E6	Uncharacterized protein.	Uncharacterized protein.	0.902
ASZ78_001529	ASZ78_016588	A0A226M766	A0A226MF36	ASD2 domain-containing protein.	ASD1 domain-containing protein.	0.477
ASZ78_001805	ASZ78_004509	A0A226MHH2	A0A226MW39	PH domain-containing protein.	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.724
ASZ78_002176	ASZ78_006427	A0A226NMN8	A0A226MLR7	Uncharacterized protein.	LLGL domain-containing protein.	0.984
ASZ78_003032	ASZ78_005037	A0A226MAR0	A0A226NDK1	Uncharacterized protein.	Uncharacterized protein.	0.787
ASZ78_003032	ASZ78_009611	A0A226MAR0	A0A226NMZ6	Uncharacterized protein.	Uncharacterized protein.	0.858
ASZ78_003032	ASZ78_010170	A0A226MAR0	A0A226MQ63	Uncharacterized protein.	PH domain-containing protein.	0.850
ASZ78_003032	ASZ78_010263	A0A226MAR0	A0A226NH56	Uncharacterized protein.	Uncharacterized protein.	0.471
ASZ78_003032	ASZ78_013506	A0A226MAR0	A0A226MA36	Uncharacterized protein.	Uncharacterized protein.	0.844
ASZ78_003032	ASZ78_016176	A0A226MAR0	A0A226M7U4	Uncharacterized protein.	Uncharacterized protein.	0.752
ASZ78_003092	ASZ78_005037	A0A226MIJ8	A0A226NDK1	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.787
ASZ78_003092	ASZ78_009611	A0A226MIJ8	A0A226NMZ6	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein.	0.898
ASZ78_003372	ASZ78_004227	A0A226MCG8	A0A226M6X4	ASD2 domain-containing protein.	Uncharacterized protein.	0.619
ASZ78_003372	ASZ78_016588	A0A226MCG8	A0A226MF36	ASD2 domain-containing protein.	ASD1 domain-containing protein.	0.814
ASZ78_003372	ASZ78_016589	A0A226MCG8	A0A226MFE2	ASD2 domain-containing protein.	Uncharacterized protein.	0.862
ASZ78_004227	ASZ78_003372	A0A226M6X4	A0A226MCG8	Uncharacterized protein.	ASD2 domain-containing protein.	0.619
ASZ78_004509	ASZ78_001805	A0A226MW39	A0A226MHH2	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.	PH domain-containing protein.	0.724