(19 nodes) Animal organ regeneration network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_006159	GATA-type domain-containing protein. (165 aa)
	ASZ78_009237	Pkinase_Tyr domain-containing protein. (300 aa)
	ASZ78_017087	CCAAT/enhancer-binding protein. (279 aa)
	ASZ78_001638	Uncharacterized protein. (100 aa)
	ASZ78_008298	Uncharacterized protein. (280 aa)
	ASZ78_001959	FHA domain-containing protein. (2519 aa)
	ASZ78_006247	Uncharacterized protein. (1262 aa)
	ASZ78_004283	Peptidase_M14 domain-containing protein. (380 aa)
	ASZ78_013235	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (670 aa)
	ASZ78_011070	NR LBD domain-containing protein. (262 aa)
	ASZ78_001929	Uncharacterized protein. (437 aa)
	ASZ78_001927	Uncharacterized protein. (466 aa)
	ASZ78_001928	Uncharacterized protein. (461 aa)
	ASZ78_008962	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1660 aa)
	ASZ78_006838	Uncharacterized protein. (685 aa)
	ASZ78_008326	Uncharacterized protein. (203 aa)
	ASZ78_008327	Uncharacterized protein. (315 aa)
	ASZ78_003720	Uncharacterized protein. (691 aa)
	ASZ78_002216	Sulfhydryl oxidase. (191 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_001638	ASZ78_017087	A0A226MIV8	A0A226MH09	Uncharacterized protein.	CCAAT/enhancer-binding protein.	0.423
ASZ78_001927	ASZ78_001928	A0A226N728	A0A226N792	Uncharacterized protein.	Uncharacterized protein.	0.968
ASZ78_001927	ASZ78_001929	A0A226N728	A0A226N6Y1	Uncharacterized protein.	Uncharacterized protein.	0.906
ASZ78_001928	ASZ78_001927	A0A226N792	A0A226N728	Uncharacterized protein.	Uncharacterized protein.	0.968
ASZ78_001928	ASZ78_001929	A0A226N792	A0A226N6Y1	Uncharacterized protein.	Uncharacterized protein.	0.907
ASZ78_001929	ASZ78_001927	A0A226N6Y1	A0A226N728	Uncharacterized protein.	Uncharacterized protein.	0.906
ASZ78_001929	ASZ78_001928	A0A226N6Y1	A0A226N792	Uncharacterized protein.	Uncharacterized protein.	0.907
ASZ78_008298	ASZ78_009237	A0A226MNA1	A0A226MFQ2	Uncharacterized protein.	Pkinase_Tyr domain-containing protein.	0.759
ASZ78_008298	ASZ78_017087	A0A226MNA1	A0A226MH09	Uncharacterized protein.	CCAAT/enhancer-binding protein.	0.676
ASZ78_008326	ASZ78_008327	A0A226NBP3	A0A226NBR2	Uncharacterized protein.	Uncharacterized protein.	0.833
ASZ78_008327	ASZ78_008326	A0A226NBR2	A0A226NBP3	Uncharacterized protein.	Uncharacterized protein.	0.833
ASZ78_008962	ASZ78_011070	A0A226N7Z3	A0A226MYS0	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	NR LBD domain-containing protein.	0.673
ASZ78_009237	ASZ78_008298	A0A226MFQ2	A0A226MNA1	Pkinase_Tyr domain-containing protein.	Uncharacterized protein.	0.759
ASZ78_011070	ASZ78_008962	A0A226MYS0	A0A226N7Z3	NR LBD domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.673
ASZ78_011070	ASZ78_013235	A0A226MYS0	A0A226MX92	NR LBD domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.673
ASZ78_013235	ASZ78_011070	A0A226MX92	A0A226MYS0	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	NR LBD domain-containing protein.	0.673
ASZ78_017087	ASZ78_001638	A0A226MH09	A0A226MIV8	CCAAT/enhancer-binding protein.	Uncharacterized protein.	0.423
ASZ78_017087	ASZ78_008298	A0A226MH09	A0A226MNA1	CCAAT/enhancer-binding protein.	Uncharacterized protein.	0.676