(8 nodes) Floor plate development network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_000965	Uncharacterized protein. (568 aa)
	ASZ78_017013	Uncharacterized protein. (829 aa)
	ASZ78_017012	Cobl domain-containing protein. (225 aa)
	ASZ78_014407	Uncharacterized protein. (102 aa)
	ASZ78_008890	BHLH domain-containing protein. (110 aa)
	ASZ78_002895	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (425 aa)
	ASZ78_001590	C2H2-type domain-containing protein. (463 aa)
	ASZ78_000494	Uncharacterized protein. (902 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_002895	ASZ78_017012	A0A226N909	A0A226MZ13	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Cobl domain-containing protein.	0.401
ASZ78_002895	ASZ78_017013	A0A226N909	A0A226MZ10	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Uncharacterized protein.	0.401
ASZ78_017012	ASZ78_002895	A0A226MZ13	A0A226N909	Cobl domain-containing protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.401
ASZ78_017012	ASZ78_017013	A0A226MZ13	A0A226MZ10	Cobl domain-containing protein.	Uncharacterized protein.	0.899
ASZ78_017013	ASZ78_002895	A0A226MZ10	A0A226N909	Uncharacterized protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.401
ASZ78_017013	ASZ78_017012	A0A226MZ10	A0A226MZ13	Uncharacterized protein.	Cobl domain-containing protein.	0.899