(8 nodes) Protein kinase A catalytic subunit binding network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_014851	FERM domain-containing protein. (606 aa)
	ASZ78_008243	HMG box domain-containing protein. (496 aa)
	ASZ78_009406	Uncharacterized protein. (678 aa)
	ASZ78_007446	Uncharacterized protein. (426 aa)
	ASZ78_008832	Ion_trans domain-containing protein; Belongs to the potassium channel family. (305 aa)
	ASZ78_006558	Cyclic nucleotide-binding domain-containing protein. (345 aa)
	ASZ78_000655	Uncharacterized protein. (382 aa)
	ASZ78_005348	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (361 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000655	ASZ78_006558	A0A226NFR1	A0A226NC67	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.604
ASZ78_000655	ASZ78_007446	A0A226NFR1	A0A226MYY1	Uncharacterized protein.	Uncharacterized protein.	0.935
ASZ78_006558	ASZ78_000655	A0A226NC67	A0A226NFR1	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.604
ASZ78_006558	ASZ78_007446	A0A226NC67	A0A226MYY1	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.584
ASZ78_007446	ASZ78_000655	A0A226MYY1	A0A226NFR1	Uncharacterized protein.	Uncharacterized protein.	0.935
ASZ78_007446	ASZ78_006558	A0A226MYY1	A0A226NC67	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.584