(10 nodes) Inner dynein arm assembly network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_013634	Uncharacterized protein. (936 aa)
	ASZ78_012064	Uncharacterized protein. (423 aa)
	ASZ78_012797	DUF4200 domain-containing protein. (533 aa)
	ASZ78_011933	Uncharacterized protein. (424 aa)
	ASZ78_016553	Uncharacterized protein. (900 aa)
	ASZ78_009485	Dynein assembly factor 1, axonemal. (377 aa)
	ASZ78_004715	SUN domain-containing protein. (1390 aa)
	ASZ78_000574	PIH1_CS domain-containing protein. (177 aa)
	ASZ78_003947	Uncharacterized protein. (256 aa)
	ASZ78_002521	Uncharacterized protein. (469 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000574	ASZ78_002521	A0A226MPD3	A0A226MG48	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.478
ASZ78_000574	ASZ78_003947	A0A226MPD3	A0A226MMW2	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.408
ASZ78_000574	ASZ78_004715	A0A226MPD3	A0A226NJP5	PIH1_CS domain-containing protein.	SUN domain-containing protein.	0.479
ASZ78_000574	ASZ78_009485	A0A226MPD3	A0A226MSA1	PIH1_CS domain-containing protein.	Dynein assembly factor 1, axonemal.	0.422
ASZ78_000574	ASZ78_012064	A0A226MPD3	A0A226N409	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.558
ASZ78_000574	ASZ78_013634	A0A226MPD3	A0A226N0L1	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.424
ASZ78_000574	ASZ78_016553	A0A226MPD3	A0A226MZQ7	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.432
ASZ78_002521	ASZ78_000574	A0A226MG48	A0A226MPD3	Uncharacterized protein.	PIH1_CS domain-containing protein.	0.478
ASZ78_002521	ASZ78_003947	A0A226MG48	A0A226MMW2	Uncharacterized protein.	Uncharacterized protein.	0.720
ASZ78_002521	ASZ78_004715	A0A226MG48	A0A226NJP5	Uncharacterized protein.	SUN domain-containing protein.	0.481
ASZ78_002521	ASZ78_009485	A0A226MG48	A0A226MSA1	Uncharacterized protein.	Dynein assembly factor 1, axonemal.	0.453
ASZ78_002521	ASZ78_012064	A0A226MG48	A0A226N409	Uncharacterized protein.	Uncharacterized protein.	0.594
ASZ78_002521	ASZ78_013634	A0A226MG48	A0A226N0L1	Uncharacterized protein.	Uncharacterized protein.	0.752
ASZ78_002521	ASZ78_016553	A0A226MG48	A0A226MZQ7	Uncharacterized protein.	Uncharacterized protein.	0.740
ASZ78_003947	ASZ78_000574	A0A226MMW2	A0A226MPD3	Uncharacterized protein.	PIH1_CS domain-containing protein.	0.408
ASZ78_003947	ASZ78_002521	A0A226MMW2	A0A226MG48	Uncharacterized protein.	Uncharacterized protein.	0.720
ASZ78_003947	ASZ78_004715	A0A226MMW2	A0A226NJP5	Uncharacterized protein.	SUN domain-containing protein.	0.468
ASZ78_003947	ASZ78_009485	A0A226MMW2	A0A226MSA1	Uncharacterized protein.	Dynein assembly factor 1, axonemal.	0.570
ASZ78_003947	ASZ78_012064	A0A226MMW2	A0A226N409	Uncharacterized protein.	Uncharacterized protein.	0.461
ASZ78_003947	ASZ78_013634	A0A226MMW2	A0A226N0L1	Uncharacterized protein.	Uncharacterized protein.	0.567