(53 nodes) Multi-multicellular organism process network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_004235	Beta-hexosaminidase. (502 aa)
	ASZ78_005736	Uncharacterized protein. (167 aa)
	ASZ78_016739	AMP-binding domain-containing protein. (688 aa)
	ASZ78_006599	Uncharacterized protein. (822 aa)
	ASZ78_015305	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1023 aa)
	ASZ78_000398	Uncharacterized protein. (443 aa)
	ASZ78_012941	Uncharacterized protein. (488 aa)
	ASZ78_011299	Thyroglobulin type-1 domain-containing protein. (145 aa)
	ASZ78_013235	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (670 aa)
	ASZ78_013308	Uncharacterized protein. (442 aa)
	ASZ78_001968	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)
	ASZ78_016856	Uncharacterized protein. (467 aa)
	ASZ78_004400	Uncharacterized protein. (851 aa)
	ASZ78_002445	ABC transmembrane type-1 domain-containing protein. (480 aa)
	ASZ78_009885	Uncharacterized protein. (545 aa)
	ASZ78_006944	Hyaluronidase. (420 aa)
	ASZ78_010568	Uncharacterized protein. (689 aa)
	ASZ78_001417	SERPIN domain-containing protein; Belongs to the serpin family. (435 aa)
	ASZ78_008878	Stork_head domain-containing protein. (911 aa)
	ASZ78_016410	Uncharacterized protein. (389 aa)
	ASZ78_016421	Uncharacterized protein. (226 aa)
	ASZ78_000021	Uncharacterized protein. (499 aa)
	ASZ78_005753	Uncharacterized protein. (953 aa)
	ASZ78_008789	SMB domain-containing protein. (327 aa)
	ASZ78_010681	PITH domain-containing protein. (214 aa)
	ASZ78_016969	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily. (704 aa)
	ASZ78_014332	Motilin_assoc domain-containing protein. (81 aa)
	ASZ78_011846	Uncharacterized protein. (1066 aa)
	ASZ78_006374	Uncharacterized protein. (232 aa)
	ASZ78_006760	RRM domain-containing protein. (329 aa)
	ASZ78_014933	Uncharacterized protein. (3112 aa)
	ASZ78_003338	Uncharacterized protein. (589 aa)
	ASZ78_005245	Integrin beta; Belongs to the integrin beta chain family. (795 aa)
	ASZ78_014411	Uncharacterized protein. (675 aa)
	ASZ78_013692	Integrin beta. (1530 aa)
	ASZ78_006302	Uncharacterized protein. (352 aa)
	ASZ78_002312	XendoU domain-containing protein. (285 aa)
	ASZ78_006478	Uncharacterized protein. (683 aa)
	ASZ78_010870	Sulfatase domain-containing protein. (159 aa)
	ASZ78_010871	Sulfatase domain-containing protein. (342 aa)
	ASZ78_007588	CRF domain-containing protein. (108 aa)
	ASZ78_008962	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1660 aa)
	ASZ78_002026	Uncharacterized protein. (67 aa)
	ASZ78_002024	GOLD domain-containing protein. (209 aa)
	ASZ78_005935	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1071 aa)
	ASZ78_000147	Thioredoxin domain-containing protein. (258 aa)
	ASZ78_016288	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (390 aa)
	ASZ78_008182	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (347 aa)
	ASZ78_007274	DAO domain-containing protein. (342 aa)
	ASZ78_009781	Uncharacterized protein. (359 aa)
	ASZ78_008588	Uncharacterized protein. (239 aa)
	ASZ78_003223	G_PROTEIN_RECEP_F1_2 domain-containing protein. (541 aa)
	ASZ78_004252	Uncharacterized protein. (335 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_000398	ASZ78_008962	A0A226NLP2	A0A226N7Z3	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.680
ASZ78_000398	ASZ78_013235	A0A226NLP2	A0A226MX92	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.680
ASZ78_001417	ASZ78_010568	A0A226MQA9	A0A226MQL1	SERPIN domain-containing protein; Belongs to the serpin family.	Uncharacterized protein.	0.445
ASZ78_001968	ASZ78_004235	A0A226MUK9	A0A226NFC3	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Beta-hexosaminidase.	0.487
ASZ78_001968	ASZ78_016410	A0A226MUK9	A0A226MPK8	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.503
ASZ78_002024	ASZ78_006944	A0A226N958	A0A226MSD2	GOLD domain-containing protein.	Hyaluronidase.	0.439
ASZ78_002026	ASZ78_006944	A0A226N908	A0A226MSD2	Uncharacterized protein.	Hyaluronidase.	0.439
ASZ78_004235	ASZ78_001968	A0A226NFC3	A0A226MUK9	Beta-hexosaminidase.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.487
ASZ78_004235	ASZ78_010870	A0A226NFC3	A0A226N787	Beta-hexosaminidase.	Sulfatase domain-containing protein.	0.484
ASZ78_004235	ASZ78_010871	A0A226NFC3	A0A226N7H0	Beta-hexosaminidase.	Sulfatase domain-containing protein.	0.484
ASZ78_004252	ASZ78_007588	A0A226NFD3	A0A226N7L4	Uncharacterized protein.	CRF domain-containing protein.	0.877
ASZ78_004400	ASZ78_005935	A0A226MTF3	A0A226N9K6	Uncharacterized protein.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.561
ASZ78_004400	ASZ78_006302	A0A226MTF3	A0A226N210	Uncharacterized protein.	Uncharacterized protein.	0.473
ASZ78_005245	ASZ78_010568	A0A226MZQ1	A0A226MQL1	Integrin beta; Belongs to the integrin beta chain family.	Uncharacterized protein.	0.447
ASZ78_005245	ASZ78_013692	A0A226MZQ1	A0A226N1K5	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta.	0.710
ASZ78_005935	ASZ78_004400	A0A226N9K6	A0A226MTF3	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Uncharacterized protein.	0.561
ASZ78_006302	ASZ78_004400	A0A226N210	A0A226MTF3	Uncharacterized protein.	Uncharacterized protein.	0.473
ASZ78_006302	ASZ78_008588	A0A226N210	A0A226NEC2	Uncharacterized protein.	Uncharacterized protein.	0.417
ASZ78_006302	ASZ78_010568	A0A226N210	A0A226MQL1	Uncharacterized protein.	Uncharacterized protein.	0.415
ASZ78_006374	ASZ78_014332	A0A226MIA8	A0A226ML72	Uncharacterized protein.	Motilin_assoc domain-containing protein.	0.451