(36 nodes) Regulation of viral genome replication network (Callipepla squamata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ASZ78_013132	DRBM domain-containing protein. (105 aa)
	ASZ78_004277	DRBM domain-containing protein. (107 aa)
	ASZ78_006276	Uncharacterized protein. (414 aa)
	ASZ78_004278	Uncharacterized protein. (155 aa)
	ASZ78_009670	DUF3715 domain-containing protein. (1636 aa)
	CXCL8	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family. (95 aa)
	ASZ78_015387	Uncharacterized protein. (1049 aa)
	ASZ78_010639	Endo/exonuclease/phosphatase domain-containing protein. (572 aa)
	ASZ78_007150	Uncharacterized protein. (1334 aa)
	ASZ78_003571	HTH La-type RNA-binding domain-containing protein. (1105 aa)
	ASZ78_003884	CW-type domain-containing protein. (888 aa)
	ASZ78_007956	Peptidylprolyl isomerase. (311 aa)
	ASZ78_002119	CMP/dCMP-type deaminase domain-containing protein. (202 aa)
	ASZ78_010675	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
	ASZ78_005788	Uncharacterized protein. (468 aa)
	ASZ78_012529	IPPc domain-containing protein. (455 aa)
	ASZ78_006942	25A_SYNTH_3 domain-containing protein. (389 aa)
	ASZ78_012886	Uncharacterized protein. (1593 aa)
	ASZ78_003247	Uncharacterized protein. (2021 aa)
	ASZ78_007057	CARD_2 domain-containing protein. (586 aa)
	ASZ78_015023	Uncharacterized protein. (690 aa)
	ASZ78_007188	Uncharacterized protein. (701 aa)
	ASZ78_000262	Uncharacterized protein. (393 aa)
	ASZ78_005157	Uncharacterized protein. (285 aa)
	ASZ78_005070	Protein kinase domain-containing protein. (215 aa)
	ASZ78_011773	Elp3 domain-containing protein. (356 aa)
	ASZ78_003224	Uncharacterized protein. (370 aa)
	ASZ78_011899	Uncharacterized protein. (489 aa)
	ASZ78_011580	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (175 aa)
	ASZ78_006003	BH4_2 domain-containing protein. (226 aa)
	ASZ78_010335	RNase_Zc3h12a domain-containing protein. (929 aa)
	ASZ78_016677	Nuclear receptor domain-containing protein. (70 aa)
	ASZ78_014270	CW-type domain-containing protein. (759 aa)
	ASZ78_016678	NR LBD domain-containing protein. (375 aa)
	ASZ78_005332	Uncharacterized protein. (596 aa)
	ASZ78_011374	Uncharacterized protein. (930 aa)

Your Current Organism:

Callipepla squamata

NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ78_003224	ASZ78_006003	A0A226NEW6	A0A226NIW8	Uncharacterized protein.	BH4_2 domain-containing protein.	0.747
ASZ78_003224	ASZ78_010675	A0A226NEW6	A0A226MME1	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.492
ASZ78_003247	ASZ78_005070	A0A226MXS5	A0A226NCX4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.587
ASZ78_003247	ASZ78_011374	A0A226MXS5	A0A226NP86	Uncharacterized protein.	Uncharacterized protein.	0.562
ASZ78_003247	ASZ78_015387	A0A226MXS5	A0A226MFW0	Uncharacterized protein.	Uncharacterized protein.	0.622
ASZ78_003884	ASZ78_009670	A0A226MLC2	A0A226ME07	CW-type domain-containing protein.	DUF3715 domain-containing protein.	0.537
ASZ78_004277	ASZ78_005070	A0A226MBQ0	A0A226NCX4	DRBM domain-containing protein.	Protein kinase domain-containing protein.	0.656
ASZ78_004277	ASZ78_015023	A0A226MBQ0	A0A226N0B5	DRBM domain-containing protein.	Uncharacterized protein.	0.477
ASZ78_004278	ASZ78_005070	A0A226MC69	A0A226NCX4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.656
ASZ78_004278	ASZ78_015023	A0A226MC69	A0A226N0B5	Uncharacterized protein.	Uncharacterized protein.	0.477
ASZ78_005070	ASZ78_003247	A0A226NCX4	A0A226MXS5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.587
ASZ78_005070	ASZ78_004277	A0A226NCX4	A0A226MBQ0	Protein kinase domain-containing protein.	DRBM domain-containing protein.	0.656
ASZ78_005070	ASZ78_004278	A0A226NCX4	A0A226MC69	Protein kinase domain-containing protein.	Uncharacterized protein.	0.656
ASZ78_005070	ASZ78_006276	A0A226NCX4	A0A226MBQ2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.656
ASZ78_005070	ASZ78_006942	A0A226NCX4	A0A226MSQ2	Protein kinase domain-containing protein.	25A_SYNTH_3 domain-containing protein.	0.582
ASZ78_005070	ASZ78_007057	A0A226NCX4	A0A226MY38	Protein kinase domain-containing protein.	CARD_2 domain-containing protein.	0.596
ASZ78_005070	ASZ78_007188	A0A226NCX4	A0A226N107	Protein kinase domain-containing protein.	Uncharacterized protein.	0.793
ASZ78_005070	ASZ78_011374	A0A226NCX4	A0A226NP86	Protein kinase domain-containing protein.	Uncharacterized protein.	0.956
ASZ78_005070	ASZ78_011773	A0A226NCX4	A0A226NDU6	Protein kinase domain-containing protein.	Elp3 domain-containing protein.	0.939
ASZ78_005070	ASZ78_013132	A0A226NCX4	A0A226M9M6	Protein kinase domain-containing protein.	DRBM domain-containing protein.	0.656